Protein Info for IAI47_08705 in Pantoea sp. MT58

Annotation: carboxy terminal-processing peptidase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 679 signal peptide" amino acids 1 to 22 (22 residues), see Phobius details PF17804: TSP_NTD" amino acids 48 to 231 (184 residues), 204.5 bits, see alignment E=3.7e-64 TIGR00225: C-terminal processing peptidase" amino acids 193 to 550 (358 residues), 412.4 bits, see alignment E=6.5e-128 PF00595: PDZ" amino acids 240 to 319 (80 residues), 44.2 bits, see alignment E=4.2e-15 PF03572: Peptidase_S41" amino acids 355 to 527 (173 residues), 166.3 bits, see alignment E=9.3e-53 PF11818: DUF3340" amino acids 534 to 666 (133 residues), 141.3 bits, see alignment E=5.9e-45

Best Hits

Swiss-Prot: 82% identical to PRC_SALTY: Tail-specific protease (prc) from Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)

KEGG orthology group: K03797, carboxyl-terminal processing protease [EC: 3.4.21.102] (inferred from 86% identity to ebi:EbC_24710)

MetaCyc: 82% identical to tail-specific protease (Escherichia coli K-12 substr. MG1655)
C-terminal processing peptidase. [EC: 3.4.21.102]

Predicted SEED Role

"Tail-specific protease precursor (EC 3.4.21.102)" (EC 3.4.21.102)

Isozymes

No predicted isozymes

Use Curated BLAST to search for 3.4.21.102

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (679 amino acids)

>IAI47_08705 carboxy terminal-processing peptidase (Pantoea sp. MT58)
MNTLFKVGLIAGLLLAGPSFGAENITRADQIPQLHEDPQDPTVSERVTSRFTRSHYRQFD
LDQNFSAKIFDRYLNMLDYSHNVLLASDVAQFASKKTTVGDELRSGKLDLFYDIYNLAQK
RRFERYQYALTVLARPMNFSGNDTIDIDRAKAPWPKNEAELNALWDAKVKYDQLSLKLAG
KDDNEIRDVLTKRYNFAIRRLAQSNGEDVFQLVMNAFAREIDPHTSYLSPRNTEQFNTEM
SLSLEGIGAVLQMDDDYTVINSMVAGGPAAKSKAITVGDRIVGVGQPGKPMEDVIGWRLD
DVVAKIKGPKGSKVRLEVLPAGKGTKTRTVTLTREKIRLEDRAVKLTIKNVGKQKVGVLD
IPGFYVGLTDDVKVQLQKLQKQNVDSVVIDLRTNGGGALTEAVSLSGLFIPSGPVVQVRD
NNGRVREDSDNDGVVYYKGPLVVLVDRFSASASEIFAAAMQDYGRAVIVGEPTFGKGTVQ
QYRSLNRIYDQMLRPEWPALGSVSYTIQKFYRINGGSTQRKGVTPDLLMPTGVEAAETGE
KFEDNALPWDSIKAATYTKTGDVKPLVAQLTKQHADRIAQDREFQYIMKDIARYNALKDK
RNIVSLNLAQREKENHEDDASRLERINARYQAEGKKPLKNLDELPKDYKEPDPYLDETVK
IANDLAQLEKSQPDAPAAK