Protein Info for IAI47_08465 in Pantoea sp. MT58
Annotation: zinc ABC transporter substrate-binding protein ZnuA
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
Swiss-Prot: 71% identical to ZNUA_ECOLI: High-affinity zinc uptake system protein ZnuA (znuA) from Escherichia coli (strain K12)
KEGG orthology group: K09815, zinc transport system substrate-binding protein (inferred from 97% identity to pva:Pvag_1662)MetaCyc: 71% identical to Zn2+ ABC transporter periplasmic binding protein (Escherichia coli K-12 substr. MG1655)
ABC-63-RXN [EC: 7.2.2.20]
Predicted SEED Role
"Zinc ABC transporter, periplasmic-binding protein ZnuA" in subsystem Transport of Zinc
Isozymes
No predicted isozymesUse Curated BLAST to search for 7.2.2.20
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
Find the best match in UniProt
Protein Sequence (315 amino acids)
>IAI47_08465 zinc ABC transporter substrate-binding protein ZnuA (Pantoea sp. MT58) MLHNKKGAIFALGALTVSALLTLPAQANVVASLKPVGFIAAAIADGVTPVEVLLPDGASE HDYSLRPSDAKRLKNADLVVWVGPEMEAFMAKSAAELPAQKNLAMVNIDGVKPLLISGGE DEEEHAAEKSEDQDADAHHHHHGEFNMHLWLSPEIARKTAVAIHGKLLELMPQDKAKLDA NLQQFEVALADTDKRVSAQLAPVKNKGYFVFHDAYTYFEKHYGLSPTGHFTVNPEIQPGA QRLHQIRTQLVEQKAVCVFAEPQFRPAVIDAVSRGTQVRKGTLDPLGTDISLAKDSYVKF LSQLSSQYESCLNGA