Protein Info for IAI47_07765 in Pantoea sp. MT58
Annotation: carbon-phosphorus lyase complex subunit PhnI
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
Swiss-Prot: 72% identical to PHNI_ECOLI: Alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnI (phnI) from Escherichia coli (strain K12)
KEGG orthology group: K06164, PhnI protein (inferred from 98% identity to pva:Pvag_1849)MetaCyc: 72% identical to carbon-phosphorus lyase core complex subunit PhnI (Escherichia coli K-12 substr. MG1655)
RXN-17954 [EC: 2.7.8.37]; 2.7.8.37 [EC: 2.7.8.37]
Predicted SEED Role
"PhnI protein" in subsystem Alkylphosphonate utilization
MetaCyc Pathways
- methylphosphonate degradation I (5/5 steps found)
- (aminomethyl)phosphonate degradation (7/8 steps found)
- methylphosphonate degradation II (3/5 steps found)
- glyphosate degradation III (4/7 steps found)
Isozymes
No predicted isozymesUse Curated BLAST to search for 2.7.8.37
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
Find the best match in UniProt
Protein Sequence (358 amino acids)
>IAI47_07765 carbon-phosphorus lyase complex subunit PhnI (Pantoea sp. MT58) MYVAVKGGEKAISNAHQLQADLRRGDRAVAELGCDQVAQQLGLAVDRVMTEGGIYDPELA ALAIKQASGDLVEAIFLLRAYRTTLPRLAESTPLATGSMRIERRISAVYKDLPGGQVLGP TYDYSHRLLDFTLLANGETPAAPRDDRSVPDQCPHMFSMMTEEGLATAESDDGSEPVDIT REPMRFPASRAARLQQLVRGDEGFLLALGYSTQRGYGRTHPFAGEIRTGYLSVSICPEEL GFELEIGEVLLTECEMVNGVAHRDDAAPQFTRGYGLVFGRAERKAMAMALVDRALQSREQ NERVTSPAQDEEFVLSHADNVEAAGFVSHLKLPHYVDFQAELELLKQLQHDYQERNHG