Protein Info for IAI47_07690 in Pantoea sp. MT58

Annotation: cytosine permease

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 438 transmembrane" amino acids 31 to 51 (21 residues), see Phobius details amino acids 58 to 79 (22 residues), see Phobius details amino acids 100 to 117 (18 residues), see Phobius details amino acids 129 to 151 (23 residues), see Phobius details amino acids 158 to 178 (21 residues), see Phobius details amino acids 194 to 214 (21 residues), see Phobius details amino acids 234 to 260 (27 residues), see Phobius details amino acids 280 to 303 (24 residues), see Phobius details amino acids 319 to 340 (22 residues), see Phobius details amino acids 346 to 366 (21 residues), see Phobius details amino acids 378 to 399 (22 residues), see Phobius details amino acids 405 to 422 (18 residues), see Phobius details PF02133: Transp_cyt_pur" amino acids 18 to 396 (379 residues), 83.4 bits, see alignment E=7.9e-28

Best Hits

KEGG orthology group: K10974, cytosine permease (inferred from 98% identity to pva:Pvag_1867)

Predicted SEED Role

"Cytosine/purine/uracil/thiamine/allantoin permease family protein" in subsystem Purine Utilization

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (438 amino acids)

>IAI47_07690 cytosine permease (Pantoea sp. MT58)
MKTSDTPALEQEFEHEPVPLTHRHSTRSVSAVWFGFPMILTNALFGGIITWHLGFWPALI
AILLGNLVLFAYVGALSWYAGNSGMNFALQARRTFGSKGYILVSGFLSTVVIGWYAFQTG
LTGTVINQTFGWNALAVTAFAMILYTGITFLGVRALSVLGMIAAPLFVVLGMVALWLISK
QHDFSVVTQWKGSASAAGAMSMGTAVTMVVAGFADSGTMTADFTRWSKNGRSAVIAAFSA
FPVANVISYLFGVVIVAVGAAVDPLTNGGNFLPMLMGHSAILSVVACLFVFINLGSVCTH
CLYNGAVGFSHLFSSKMRLWTLILGAIGGALALAGVWSYFLEWLSLLGIVVPPFGAVMIV
DLIFMARISEQRPAQRFRGTAFAAWAIGSLCAVIAHVAFPQFGEAVIGLVTAAISYSVIS
KMRMPRPVMENSNARLQR