Protein Info for IAI47_07190 in Pantoea sp. MT58

Annotation: ketopantoate reductase family protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 304 signal peptide" amino acids 1 to 23 (23 residues), see Phobius details TIGR00745: 2-dehydropantoate 2-reductase" amino acids 2 to 293 (292 residues), 203.3 bits, see alignment E=2.8e-64 PF02558: ApbA" amino acids 3 to 151 (149 residues), 131.5 bits, see alignment E=2e-42 PF08546: ApbA_C" amino acids 177 to 293 (117 residues), 76.4 bits, see alignment E=2.5e-25

Best Hits

Swiss-Prot: 35% identical to YKPB_BACSU: Uncharacterized oxidoreductase YkpB (ykpB) from Bacillus subtilis (strain 168)

KEGG orthology group: K00077, 2-dehydropantoate 2-reductase [EC: 1.1.1.169] (inferred from 93% identity to pva:Pvag_1932)

Predicted SEED Role

"2-dehydropantoate 2-reductase (EC 1.1.1.169)" in subsystem Coenzyme A Biosynthesis (EC 1.1.1.169)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 1.1.1.169

Use Curated BLAST to search for 1.1.1.169

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (304 amino acids)

>IAI47_07190 ketopantoate reductase family protein (Pantoea sp. MT58)
MRILMAGAGATGGYFGARLIQAGQDVTFLVRERRYQQLQTHGLVLQTPQGTEKFQTQLTQ
ASTLKSHYDLIIVTVKSFALEQVMDDIAPAVGPETLIMPILNGMRHIATLQQRFGEDKVI
GGLCKINATLGDKGEVIQMTPLHQLLYGALDGKNDARLQRVDAALRDCQVDTLFSDNIMD
ELWEKWLLLSTLGAVCCLARGNTQQILTSRGGEALLQGIFTEILSVISAEGYQPRPAVTA
RIFELLNNPATPMTSSMYRDLTQGFDIEADQVIGDLLLRAKRNGLATPLLNAVDVNLQVY
LQQR