Protein Info for IAI47_06905 in Pantoea sp. MT58

Annotation: uridine kinase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 213 signal peptide" amino acids 1 to 21 (21 residues), see Phobius details TIGR00235: uridine kinase" amino acids 5 to 213 (209 residues), 309.1 bits, see alignment E=6.8e-97 PF00485: PRK" amino acids 10 to 199 (190 residues), 153.1 bits, see alignment E=4.3e-49

Best Hits

Swiss-Prot: 92% identical to URK_ERWT9: Uridine kinase (udk) from Erwinia tasmaniensis (strain DSM 17950 / CIP 109463 / Et1/99)

KEGG orthology group: K00876, uridine kinase [EC: 2.7.1.48] (inferred from 100% identity to pva:Pvag_1989)

MetaCyc: 88% identical to uridine/cytidine kinase (Escherichia coli K-12 substr. MG1655)
Uridine kinase. [EC: 2.7.1.213, 2.7.1.48]; 2.7.1.48 [EC: 2.7.1.213, 2.7.1.48]; 2.7.1.48 [EC: 2.7.1.213, 2.7.1.48]; 2.7.1.48 [EC: 2.7.1.213, 2.7.1.48]

Predicted SEED Role

"Uridine kinase (EC 2.7.1.48) [C1]" (EC 2.7.1.48)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 2.7.1.213 or 2.7.1.48

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (213 amino acids)

>IAI47_06905 uridine kinase (Pantoea sp. MT58)
MTDKSHQCVIVGIAGASASGKSLIASTLYREIRDQVGDEHIGVIPEDAYYKDQSHLTMEE
RVKTNYDHPSAMDHDLLLQHLQAVKAGQDIELPVYSYVEHTRTQQTQHLKAKKVIILEGI
LLLTDARLRQELNFSIFVDTPLDICLMRRMKRDVNERGRSMDSVMSQYQKTVRPMFLQFI
EPSKQYADIIVPRGGKNRIAIDILKAKINQFFE