Protein Info for IAI47_06900 in Pantoea sp. MT58

Annotation: phosphatase PAP2 family protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 204 transmembrane" amino acids 6 to 28 (23 residues), see Phobius details amino acids 36 to 61 (26 residues), see Phobius details amino acids 69 to 90 (22 residues), see Phobius details amino acids 100 to 120 (21 residues), see Phobius details amino acids 127 to 145 (19 residues), see Phobius details amino acids 156 to 175 (20 residues), see Phobius details PF01569: PAP2" amino acids 72 to 145 (74 residues), 34.3 bits, see alignment E=9.4e-13

Best Hits

KEGG orthology group: None (inferred from 96% identity to pva:Pvag_1990)

Predicted SEED Role

"FIG00635612: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (204 amino acids)

>IAI47_06900 phosphatase PAP2 family protein (Pantoea sp. MT58)
MHWKTLTYFGDSMLLIPTAVIIALILPWKSDNRLTVFYWIVAFGLAGLTVSISKILFLGF
GIGSARFNFTGFSGHSAMSATLWPVMLWLISGRWSAKWRIAAIGVGYLIPLMVGFSRLII
HAHSKSEVATGLLLGFTLSTAFLISQRRTALKGFSWPQIGAALLVPFLLMGHGRVATTQQ
FLERFSASLAGLEKPYTRADLFRQ