Protein Info for IAI47_06825 in Pantoea sp. MT58

Annotation: MFS transporter

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 427 signal peptide" amino acids 1 to 29 (29 residues), see Phobius details transmembrane" amino acids 44 to 63 (20 residues), see Phobius details amino acids 74 to 94 (21 residues), see Phobius details amino acids 99 to 121 (23 residues), see Phobius details amino acids 133 to 157 (25 residues), see Phobius details amino acids 163 to 183 (21 residues), see Phobius details amino acids 230 to 252 (23 residues), see Phobius details amino acids 272 to 293 (22 residues), see Phobius details amino acids 305 to 324 (20 residues), see Phobius details amino acids 330 to 352 (23 residues), see Phobius details amino acids 364 to 387 (24 residues), see Phobius details amino acids 395 to 415 (21 residues), see Phobius details PF07690: MFS_1" amino acids 13 to 380 (368 residues), 209.4 bits, see alignment E=7.4e-66

Best Hits

KEGG orthology group: None (inferred from 98% identity to pva:Pvag_2006)

Predicted SEED Role

"D-galactonate transporter" in subsystem D-galactonate catabolism

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (427 amino acids)

>IAI47_06825 MFS transporter (Pantoea sp. MT58)
MFKNLRWTLVLLLFLVYMINYLDRVALSLTVPLVEKDLAINAEQFGMIFGSFFFGYALFN
FVGGLATDRFGPKIVLAVAVGAWSIFCGMTALATGFWSLLILRVLFGMAEGPICSSANKA
INGWFPKKQAATAMGLLSAGSPLGGAVAGPIIGYLALAYGWRPAFVIVCCIGLVWMAFWL
FFAADNPAKSKIVTEKERLLIDRLKATNPNDEVDLAETPHPFGYYLRQPIILVTAFAFFC
YNYILFFFLSWFPAYLVQAHGLDIKSMSITTMIPWIVGFVGLALGGWISDKIFNITGKLL
LSRKIVLVVSLLAAAICVALAGTIKEVVPAVMMMSVSIFFLYITGAIYWAIIQDVVHKSR
IGSISGFIHLVGSLSGIIGPIVTGFIVQHTGKFDSAFVLAGCVAALGAFLVLFVIRSPKS
QDKPVSV