Protein Info for IAI47_06700 in Pantoea sp. MT58

Annotation: S-formylglutathione hydrolase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 280 TIGR02821: S-formylglutathione hydrolase" amino acids 6 to 278 (273 residues), 394.5 bits, see alignment E=1.4e-122 PF00756: Esterase" amino acids 25 to 272 (248 residues), 213.4 bits, see alignment E=4.6e-67 PF00326: Peptidase_S9" amino acids 131 to 260 (130 residues), 23.9 bits, see alignment E=2.8e-09

Best Hits

Swiss-Prot: 71% identical to SFGH2_ECOUT: S-formylglutathione hydrolase YeiG (yeiG) from Escherichia coli (strain UTI89 / UPEC)

KEGG orthology group: K01070, S-formylglutathione hydrolase [EC: 3.1.2.12] (inferred from 98% identity to pva:Pvag_2033)

MetaCyc: 71% identical to S-formylglutathione hydrolase / S-lactoylglutathione hydrolase (Escherichia coli K-12 substr. MG1655)
Hydroxyacylglutathione hydrolase. [EC: 3.1.2.6]; S-formylglutathione hydrolase. [EC: 3.1.2.6, 3.1.2.12]

Predicted SEED Role

"S-formylglutathione hydrolase (EC 3.1.2.12)" in subsystem Glutathione-dependent pathway of formaldehyde detoxification (EC 3.1.2.12)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 3.1.2.6

Use Curated BLAST to search for 3.1.2.12 or 3.1.2.6

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (280 amino acids)

>IAI47_06700 S-formylglutathione hydrolase (Pantoea sp. MT58)
MASTLELLEEHRIFGGWQQRWRHQSAVLNCPMTFSIYLPTPHGDAPPPVVWFLAGLTCND
ENFTTKAGAQRVAAELGLVLIMPDTSPRGDGVANDEGYDLGQGAGFYLNATQQPWASHFR
MFDYLSSELPALIADNFKVSERQSIMGHSMGGHGALMLALRLGNRFASASAFAPIVNPMQ
VPWGQKAFQAYLGDDRAAWREYDSCQLMAEVSHRLPMLIDQGDSDQFLADQLQPERLEEI
AREVGFPLTLRIQPGYDHSYFFIASFVEDHLRFHAQHLLA