Protein Info for IAI47_05625 in Pantoea sp. MT58

Annotation: MFS transporter

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 408 transmembrane" amino acids 12 to 35 (24 residues), see Phobius details amino acids 48 to 69 (22 residues), see Phobius details amino acids 81 to 97 (17 residues), see Phobius details amino acids 103 to 125 (23 residues), see Phobius details amino acids 141 to 165 (25 residues), see Phobius details amino acids 171 to 189 (19 residues), see Phobius details amino acids 221 to 241 (21 residues), see Phobius details amino acids 255 to 275 (21 residues), see Phobius details amino acids 287 to 305 (19 residues), see Phobius details amino acids 311 to 335 (25 residues), see Phobius details amino acids 347 to 368 (22 residues), see Phobius details amino acids 373 to 392 (20 residues), see Phobius details PF07690: MFS_1" amino acids 28 to 237 (210 residues), 65.7 bits, see alignment E=1.9e-22 amino acids 251 to 391 (141 residues), 46.7 bits, see alignment E=1.1e-16

Best Hits

Swiss-Prot: 72% identical to YHJX_ECOLI: Uncharacterized MFS-type transporter YhjX (yhjX) from Escherichia coli (strain K12)

KEGG orthology group: K08177, MFS transporter, OFA family, oxalate/formate antiporter (inferred from 98% identity to pva:Pvag_2167)

Predicted SEED Role

"Putative resistance protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (408 amino acids)

>IAI47_05625 MFS transporter (Pantoea sp. MT58)
MNQTQQASYQRSRWLTLFGTVITQFALGSVYTWSLFNGQLSQKLDAPVSQVAFSFGLLSL
GLAIASSLAGKLQERFGVRRVTIGAGVLMALGFWLTAHANNLMMLYFSAGLLVGLADGAG
YLMTLSNCVKWFPERKGMISACAIGAYGLGSLGFKFICGALLATVGLEQTFMIWGVLAMS
MIILGALLMREAPLQQIGTSTKGQQHTRDYTLAQSVRLPQYWMLALMFLTACMSGLYVIG
VAKDIGEGMVHLSTQTAASAVTVIAIANLSGRLVLGVLSDKMMRIRVISLAQIVSLIGMS
VLLFTRMNEMTFFLSLACVAFSFGGTITVFPSLVSDFFGLNNLTKNYGLLYLGFGIGSVL
GSLVASLFGGFTVTFSLIMTLLVISLFLSLTIRLPQSSITAEPVLQRH