Protein Info for IAI47_05275 in Pantoea sp. MT58

Annotation: phosphoribosylaminoimidazolesuccinocarboxamide synthase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 237 TIGR00081: phosphoribosylaminoimidazolesuccinocarboxamide synthase" amino acids 3 to 235 (233 residues), 266.8 bits, see alignment E=1.2e-83 PF01259: SAICAR_synt" amino acids 7 to 231 (225 residues), 257.6 bits, see alignment E=6.2e-81

Best Hits

Swiss-Prot: 91% identical to PUR7_ENT38: Phosphoribosylaminoimidazole-succinocarboxamide synthase (purC) from Enterobacter sp. (strain 638)

KEGG orthology group: K01923, phosphoribosylaminoimidazole-succinocarboxamide synthase [EC: 6.3.2.6] (inferred from 99% identity to pva:Pvag_2234)

MetaCyc: 88% identical to phosphoribosylaminoimidazole-succinocarboxamide synthase (Escherichia coli K-12 substr. MG1655)
Phosphoribosylaminoimidazolesuccinocarboxamide synthase. [EC: 6.3.2.6]

Predicted SEED Role

"Phosphoribosylaminoimidazole-succinocarboxamide synthase (EC 6.3.2.6)" in subsystem De Novo Purine Biosynthesis (EC 6.3.2.6)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 6.3.2.6

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (237 amino acids)

>IAI47_05275 phosphoribosylaminoimidazolesuccinocarboxamide synthase (Pantoea sp. MT58)
MQKRAELYRGKAKTVYSTDNPDLLILEFRNDTSAGDGARIEQFDRKGMVNNKFNHFIMTK
LQEAGIPTQMEALLSDTEALVKKLEMVPVECVVRNRAAGSLVKRLGVEEGIVLNPPLFDL
FLKDDEKHDPMVNESYCETFGWVSKQNLARMQELTFKANEVLSKLFDDAGLILVDFKLEF
GLFNGEVTLGDEFSPDGARLWDKETLDKMDKDRFRQSLGGVVEAYEAVAQRLGVKLD