Protein Info for IAI47_05025 in Pantoea sp. MT58

Annotation: alpha-2-macroglobulin family protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1100 1200 1300 1400 1500 1631 signal peptide" amino acids 1 to 32 (32 residues), see Phobius details PF17970: bMG1" amino acids 39 to 140 (102 residues), 136.7 bits, see alignment 1.5e-43 PF21142: A2M_bMG2" amino acids 146 to 264 (119 residues), 162.8 bits, see alignment 1.7e-51 PF11974: bMG3" amino acids 266 to 359 (94 residues), 70.6 bits, see alignment 5.4e-23 PF01835: MG2" amino acids 365 to 456 (92 residues), 71.8 bits, see alignment 2.9e-23 PF17972: bMG5" amino acids 462 to 587 (126 residues), 140.4 bits, see alignment 2.3e-44 PF17962: bMG6" amino acids 614 to 718 (105 residues), 88.7 bits, see alignment 1.7e-28 PF07703: A2M_BRD" amino acids 736 to 882 (147 residues), 69.1 bits, see alignment E=2.8e-22 PF00207: A2M" amino acids 957 to 1035 (79 residues), 25.8 bits, see alignment 4.3e-09 PF07678: TED_complement" amino acids 1155 to 1250 (96 residues), 28.8 bits, see alignment 3.6e-10 PF21765: A2MG_CUB" amino acids 1421 to 1483 (63 residues), 80.4 bits, see alignment (E = 5.9e-26) PF17973: bMG10" amino acids 1484 to 1617 (134 residues), 94.3 bits, see alignment E=3.7e-30

Best Hits

KEGG orthology group: K06894, (no description) (inferred from 66% identity to ebi:EbC_33820)

Predicted SEED Role

"Alpha-2-macroglobulin"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (1631 amino acids)

>IAI47_05025 alpha-2-macroglobulin family protein (Pantoea sp. MT58)
MKKRNTRLLLSMLIGGSLLSATLLPVLPLQAAEAPSTAQVSKPLTIIDLSELQIDGAAAL
VLTFSQPLDDKQDIAQKVRLTDDKQGRVDGGWELSANRKTLRFRHPEPSRHFTVTVDAGL
RAASGETLAADYSQKIATSDIQPMVGFASRGSLLPLRITQGLPVLALNVNQVDVDFFRIK
NAGLAEFLSQWNYGNNLSSWQSQDLLKSSQLVYSGRFELNPARNTREKLQLPMSDITALQ
QPGVYLAVMKQAGTYRYSQPATLFTLSDIGLSLHRFPTQFELFAQSLANGQPLSGVSVRL
LDAKGQVLQSGTSDNTGHLRLRADEKGRILLAVQGEQTSMIDLSRPALDLAEFPVAGPQG
YDKQLFVFGPRDIYRPGEIVIVNALLRDADGHPLPVQPIKAELVQPDGQVMRTFVWQPEA
GLYQQRLTLPESAMTGNWILRLNTGDNLKREWTFHVEDFLPERMALTLKNDPQPQPADAP
VEFGIEGRYLYGAPAAGNTLQGQLYLRPAREAVAALPGYQFGDITEEGLKRTLDEVDLKL
DASGKAQLSVESQWDQLHSPLNLILQASLLETGGRPVTRRATQAIWPAEALPGIRPLFGN
KAVYDYRSDSYHDEPTVPEESLAEFDIVYANSQGKKLAADKLDVRLIRERRDYYWSFSDS
EGWQSQYGDKDLQEDERAISVPADGSTKVSFPVEWGHYRLEVQAGEKIVSSVRFQAGYDW
QDNTNGTGALRPDQVRLKLDKAAYQPGDTVHLQVDSPAAGKGYLMVESSSGTLWWQPLTV
PEGGTTVDVPVAESWRRHDLYFSAIVVRDGDKVSGATPKRAVGLLHLPMATEARRLNLTL
DAPDKIRPEQRLTVRVHAGRDGGPLPEKVNVLLSAVDSGVLSVTDFKTPDPWQAFFGRKR
YNVDQYDVFGQLIEGGGRLAALRFGGDGEDESMTRGGKKPVTHVNIVAQQLQAVTLDKEG
NGTITLPIPAFNGELRLMTQAWSDDSFGAAERKLVVAAPLISELATPRFLASGDSASLAL
DLTNLTDLPQTLKVDVASSGLVDLAGAASQSVTLAKGARTTLQIPVTAKTGFGDGEIAVQ
ISGLNLPGEQVKASKQQWKIGVRPPYPALTLNFDAVINPDQPWQIAAAALTGLDAQTLSG
QLTLSNRPPLNIASYISALYAYPYGCLEQTTSGLWPSLYTSHAELTAMGIKTSSDEARRA
AVDTGIARLAGMQRANGSFGLWDKQSEEEFWLTPYVTDFLLRASEAGYALPDNVVDRANA
RLLRYLQDPAQISGGSSDDNAALQFSVQAYAGLVLARQQRAPLGALRALYEKREKARSGL
ALMQLGVALKLMGDGQRASLAIMQGATLTRSDKAWYGDYGSTVRDEGMMIALLAENKLQP
DLQNSLLLSLSKEVRGKRWFSTQENNALYLAAHTLQQAQGGSWQAQLSGNPAPLQGDAPL
NKGLGAEQLLQGLTISNPGSAPLYGRLDVTGYPLAAPQPESNVLGIKREYFTLDGKAADL
SNLRSGELLVVRLTVSSKRSISDALVVDLLPAGLELENQNLADSSASLGDSADALKESMG
DMQQADIKHIEFRDDRFVAALAVDTYRPATLVYLARAVTPGRYLMPPPQVESMYVPEWRA
TGSTPPQLHIQ