Protein Info for IAI47_04510 in Pantoea sp. MT58

Annotation: MFS transporter

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 395 transmembrane" amino acids 12 to 29 (18 residues), see Phobius details amino acids 45 to 66 (22 residues), see Phobius details amino acids 78 to 95 (18 residues), see Phobius details amino acids 101 to 124 (24 residues), see Phobius details amino acids 135 to 154 (20 residues), see Phobius details amino acids 166 to 185 (20 residues), see Phobius details amino acids 218 to 238 (21 residues), see Phobius details amino acids 250 to 268 (19 residues), see Phobius details amino acids 280 to 298 (19 residues), see Phobius details amino acids 304 to 327 (24 residues), see Phobius details amino acids 339 to 357 (19 residues), see Phobius details amino acids 363 to 384 (22 residues), see Phobius details PF07690: MFS_1" amino acids 17 to 261 (245 residues), 107 bits, see alignment E=1e-34 amino acids 220 to 383 (164 residues), 43.8 bits, see alignment E=1.6e-15 PF00083: Sugar_tr" amino acids 39 to 182 (144 residues), 49.7 bits, see alignment E=2.7e-17

Best Hits

Swiss-Prot: 67% identical to YGAY_ECO57: Uncharacterized transporter YgaY (ygaY) from Escherichia coli O157:H7

KEGG orthology group: None (inferred from 95% identity to pva:Pvag_2361)

Predicted SEED Role

"MFS permease protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (395 amino acids)

>IAI47_04510 MFS transporter (Pantoea sp. MT58)
MNATRQGLTPALVILMSVATGLCVASNYYVQPLLNTIAQQFDLSVSLAGFIVTTAQLGYA
CGLLLLVPLGDRFDRRSLIVTMILLAAAGMVIIALSHSFPFLLLGTVMTGLFSVAAQILV
PLAATLAEPERRGKIVGTVMSGLLLGILLARTVAGGLAQLGGWRTVYWTASLLMVVMALA
LWRALPRVKQSVPMSYPQLLASIFRLYAGNRVIRTRAWTGCLAFANFSLLWTSMAFLLSG
APYHFSEGEIGLLGLVGAAGALAARQAGSLADRGKAKLTTRLGLLLMLLSWAAIAWGAAQ
LVPLIIGILLLDLAVQAVHITNQSVIYAQMPEARNRLNAGYMTSYFIGGAAGSLLSATAY
HLWGWHGVCGAGALLTLTNLLIWAKGSRFESEIIN