Protein Info for IAI47_03650 in Pantoea sp. MT58

Annotation: sugar porter family MFS transporter

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 465 signal peptide" amino acids 15 to 16 (2 residues), see Phobius details transmembrane" amino acids 17 to 43 (27 residues), see Phobius details amino acids 57 to 76 (20 residues), see Phobius details amino acids 85 to 102 (18 residues), see Phobius details amino acids 109 to 131 (23 residues), see Phobius details amino acids 143 to 161 (19 residues), see Phobius details amino acids 173 to 192 (20 residues), see Phobius details amino acids 252 to 275 (24 residues), see Phobius details amino acids 291 to 312 (22 residues), see Phobius details amino acids 321 to 343 (23 residues), see Phobius details amino acids 349 to 374 (26 residues), see Phobius details amino acids 392 to 413 (22 residues), see Phobius details amino acids 419 to 437 (19 residues), see Phobius details TIGR00879: MFS transporter, sugar porter (SP) family" amino acids 6 to 448 (443 residues), 482.4 bits, see alignment E=7.8e-149 PF06609: TRI12" amino acids 11 to 200 (190 residues), 38.7 bits, see alignment E=9.4e-14 PF00083: Sugar_tr" amino acids 19 to 451 (433 residues), 465.6 bits, see alignment E=3.7e-143 PF07690: MFS_1" amino acids 24 to 285 (262 residues), 119.1 bits, see alignment E=4.2e-38 amino acids 263 to 443 (181 residues), 37.4 bits, see alignment E=3e-13

Best Hits

Swiss-Prot: 83% identical to GALP_ECOL6: Galactose-proton symporter (galP) from Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)

KEGG orthology group: K08137, MFS transporter, SP family, galactose:H+ symporter (inferred from 99% identity to pva:Pvag_2555)

MetaCyc: 83% identical to galactose:H+ symporter (Escherichia coli K-12 substr. MG1655)
RXN0-7077; TRANS-RXN-21

Predicted SEED Role

"Arabinose-proton symporter" in subsystem L-Arabinose utilization

MetaCyc Pathways

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (465 amino acids)

>IAI47_03650 sugar porter family MFS transporter (Pantoea sp. MT58)
MPGNTHKSRTSNKAMTLFVCFLAALAGLLFGLDIGVIAGALPFIAKDFNVTPHQQEWIVS
SMMFGAAVGAIGSGWMSSRLGRKKSLMAGAILFVIGSLWSAMSPNPEMLISARVLLGLAV
GIASYTAPLYLSEIAPEKIRGSMISLYQLMITIGILGAYLTDTAFSFTGNWRWMLGIITI
PALLLLVGVFFLPNSPRWLAARGNFRDAQRVLDRLRDTSEQAKRELEEIRESLKVKQSGW
GLFTSSSHFRRAVYLGILLQVMQQFTGMNVIMYYAPKIFEIAGFTNTTQQMWGTVIVGLV
NVLATFIAIGLVDRWGRKPTLILGFMVMAAGMGVLGTMLHFGIHSAGAQYFAIGMLLMFI
VGFAMSAGPLIWVLCSEIQPLKGRDFGITVSTTTNWIANMIVGATFLTMLNTLGNANTFW
VYALLNLFFILLTLMLIPETKNVSLEHIERNLMAGKKLRDIGSRD