Protein Info for IAI47_03080 in Pantoea sp. MT58

Annotation: undecaprenyl-diphosphate phosphatase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 272 transmembrane" amino acids 7 to 26 (20 residues), see Phobius details amino acids 50 to 69 (20 residues), see Phobius details amino acids 89 to 109 (21 residues), see Phobius details amino acids 119 to 139 (21 residues), see Phobius details amino acids 151 to 171 (21 residues), see Phobius details amino acids 190 to 211 (22 residues), see Phobius details amino acids 223 to 245 (23 residues), see Phobius details amino acids 251 to 271 (21 residues), see Phobius details PF02673: BacA" amino acids 10 to 265 (256 residues), 282.7 bits, see alignment E=1.7e-88 TIGR00753: undecaprenyl-diphosphatase UppP" amino acids 10 to 264 (255 residues), 333.9 bits, see alignment E=3.8e-104

Best Hits

Swiss-Prot: 88% identical to UPPP_ERWT9: Undecaprenyl-diphosphatase (uppP) from Erwinia tasmaniensis (strain DSM 17950 / CIP 109463 / Et1/99)

KEGG orthology group: K06153, undecaprenyl-diphosphatase [EC: 3.6.1.27] (inferred from 100% identity to pva:Pvag_2662)

MetaCyc: 84% identical to undecaprenyl pyrophosphate phosphatase (Escherichia coli K-12 substr. MG1655)
RXN-11776 [EC: 3.6.1.68]; Undecaprenyl-diphosphatase. [EC: 3.6.1.68, 3.6.1.27]

Predicted SEED Role

"Undecaprenyl-diphosphatase (EC 3.6.1.27)" (EC 3.6.1.27)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 3.6.1.27 or 3.6.1.68

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (272 amino acids)

>IAI47_03080 undecaprenyl-diphosphate phosphatase (Pantoea sp. MT58)
MADIHQLWVAAILGVVEGLTEFLPVSSTGHMIIVGHLLGFEGEKAETFEVVIQLGSILAV
VVMFWRRLFGLIGIHFGEVKHEGVGTGRLSLIHILLGMVPAVVVGLVLHDQIKTLFNPIN
VMYALVVGGVLLLAAEYLKPKQPKAVGVDDITYRQAFMIGCFQCLALWPGFSRSGATISG
GMLMGVSRYAASEFSFILAVPMMMGATVLDMYKSIGFLTMADFPMFAVGFVTAFIVALIA
IKAFLELIKRISFVSFAIYRFIVAAAVYMVFM