Protein Info for IAI47_02890 in Pantoea sp. MT58

Annotation: EnvZ/OmpR regulon moderator MzrA

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 115 signal peptide" amino acids 1 to 27 (27 residues), see Phobius details transmembrane" amino acids 28 to 30 (3 residues), see Phobius details PF13721: SecD-TM1" amino acids 10 to 105 (96 residues), 70.4 bits, see alignment E=8.2e-24

Best Hits

Swiss-Prot: 84% identical to MZRA_PANAA: Modulator protein MzrA (mzrA) from Pantoea ananatis (strain AJ13355)

KEGG orthology group: None (inferred from 94% identity to pva:Pvag_2731)

Predicted SEED Role

"Uncharacterized protein YqjB"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (115 amino acids)

>IAI47_02890 EnvZ/OmpR regulon moderator MzrA (Pantoea sp. MT58)
MKLLQAIPKRWLPWLIAGAFALVALCAIPPLMKHETVVQIRVSHAGATLPDGFYLYQQLS
AQGIRIKSITPAGDALIIHFDSEEQSLAAQKVLRRLLPQGFIVAQHDHSQHLSLA