Protein Info for IAI47_02485 in Pantoea sp. MT58

Annotation: p-hydroxybenzoic acid efflux pump subunit AaeB

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 transmembrane" amino acids 7 to 26 (20 residues), see Phobius details amino acids 32 to 50 (19 residues), see Phobius details amino acids 62 to 81 (20 residues), see Phobius details amino acids 87 to 106 (20 residues), see Phobius details amino acids 114 to 136 (23 residues), see Phobius details amino acids 147 to 163 (17 residues), see Phobius details amino acids 236 to 254 (19 residues), see Phobius details amino acids 366 to 390 (25 residues), see Phobius details amino acids 402 to 421 (20 residues), see Phobius details amino acids 427 to 446 (20 residues), see Phobius details amino acids 452 to 470 (19 residues), see Phobius details amino acids 481 to 498 (18 residues), see Phobius details PF04632: FUSC" amino acids 5 to 645 (641 residues), 446 bits, see alignment E=3e-137 PF13515: FUSC_2" amino acids 17 to 158 (142 residues), 35.1 bits, see alignment E=1.3e-12

Best Hits

Swiss-Prot: 87% identical to AAEB_PANAM: p-hydroxybenzoic acid efflux pump subunit AaeB (aaeB) from Pantoea ananatis (strain LMG 20103)

KEGG orthology group: None (inferred from 97% identity to pva:Pvag_2814)

MetaCyc: 65% identical to aromatic carboxylic acid efflux pump subunit AaeB (Escherichia coli K-12 substr. MG1655)
TRANS-RXN0-233

Predicted SEED Role

"FUSARIC ACID RESISTANCE PROTEIN FUSB / FUSARIC ACID RESISTANCE PROTEIN FUSC"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (650 amino acids)

>IAI47_02485 p-hydroxybenzoic acid efflux pump subunit AaeB (Pantoea sp. MT58)
MIQFLRFPVKLTFALVLALMVGFHLNLETPRWAVMTAGIVAGGTAFAAGGDPYSGALRYR
GVLRIIGTFIGCIAALTIMIATVRAPVVMLLLCCIWAGLCVWLSSLIKVENSYALGLAGY
TALIIVVTANASGGLTLVPQYAVERCSEIVLGILCAILADMIFSPRSIKKVIDAEVDSLL
VAHYHLLQLCVAHGDKEEVDKAWGGLVRRTSALNSMRSQLMMESSRWKNSHRRLQMLNTL
SLTLITQAAETFLIQNSRPDYIPPQYRLMVEKPASTVEEVHKRMKVMRRVIGASGKSTPV
TLASWVSTATEYLLLLNGIKSNSRITSLEEEILQREVVIQARSAETHHAMINGIRTFVAT
ALGSLFWLYTGWTSGSGCMVMLAVITALAMRMPNPLMMAKDFLYGMTVAVPLGALYFMYV
LPATQQSALLLCIAIGVLGFIAGIFIQRRQIGTLGALIGTLNVVVLDNPMQFHTNVFLDN
VLGQVIGCFVAMMVILLIRDKSKARTGRKLLNRFMYAAVSAMTTNQARRRENHLPALYQQ
LFLLLNLFPGDINKYRIALTLIIGHQRLRDADVPVNADLSAYHRQLRYTADRVISASSDD
KRRYYFERLLKELDVYQEKLVHYDAPVSVTEPVKRLAMMLDKYQNTLIQI