Protein Info for IAI47_01690 in Pantoea sp. MT58

Annotation: glucose-1-phosphate adenylyltransferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 430 transmembrane" amino acids 333 to 350 (18 residues), see Phobius details TIGR02091: glucose-1-phosphate adenylyltransferase" amino acids 21 to 397 (377 residues), 502.5 bits, see alignment E=3.5e-155 PF00483: NTP_transferase" amino acids 22 to 291 (270 residues), 227.9 bits, see alignment E=1.5e-71

Best Hits

Swiss-Prot: 82% identical to GLGC_CROS8: Glucose-1-phosphate adenylyltransferase (glgC) from Cronobacter sakazakii (strain ATCC BAA-894)

KEGG orthology group: K00975, glucose-1-phosphate adenylyltransferase [EC: 2.7.7.27] (inferred from 99% identity to pva:Pvag_2979)

MetaCyc: 79% identical to glucose-1-phosphate adenylyltransferase (Escherichia coli K-12 substr. MG1655)
Glucose-1-phosphate adenylyltransferase. [EC: 2.7.7.27]

Predicted SEED Role

"Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27)" in subsystem Glycogen metabolism (EC 2.7.7.27)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 2.7.7.27

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (430 amino acids)

>IAI47_01690 glucose-1-phosphate adenylyltransferase (Pantoea sp. MT58)
MVKLDRTDHLMLARQLPTQTVALILAGGRGTRLVDLTAKRAKPAVHFGGKFRIIDFALSN
CVNSGIRRIGVITQYQSHTLTQHIQRGWSIFNEEMNEFVDLLPAQQRFSTEQWYRGTADA
VTQNLDVIRRYQAQYIVILAGDHIYKMDYSRMLLDHVVNEAKCTIACLPVPVHEATAFGV
MAVNEENMVIDFVEKPAKPPTMPGDDTQALASMGIYVFNADYLYALLEEDLQTPGSNHDF
GKDILPKIVASGEGYAHSFALSCVQNDDNAPPYWRDVGTLEAYWRANLDLASVMPELDMY
DVTWPIRTHMEPLPPAKFVQDRSGSHGMTMNSLVSGGCIISGSVVVNSVLFPRVRVNSFC
NIDSTVLLPDVVVGRSCRLRRCVIDRACELPEGMVIGENPDEDSRRFHRSDEGIVLVTRA
MLARLAKAGL