Protein Info for IAI47_01435 in Pantoea sp. MT58

Annotation: EAL domain-containing protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 528 transmembrane" amino acids 12 to 32 (21 residues), see Phobius details amino acids 239 to 261 (23 residues), see Phobius details PF12792: CSS-motif" amino acids 43 to 239 (197 residues), 106.5 bits, see alignment E=1.4e-34 PF00563: EAL" amino acids 270 to 503 (234 residues), 203.3 bits, see alignment E=4e-64

Best Hits

KEGG orthology group: None (inferred from 86% identity to pva:Pvag_3034)

Predicted SEED Role

"putative signaling membrane protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (528 amino acids)

>IAI47_01435 EAL domain-containing protein (Pantoea sp. MT58)
MPLLKRKRDYARLVIIFSGVLPLLIGLFFTALDARHTVQQHQVNAANTLLSQAERMSDSA
WDMINTLRQFQYQPCSQIQNQLQRIGSLNPYFRAIGKIEENRIGCSSAYGTMPGLLKDMI
MRDAPVTGKAWWSLSIAGTSGVPDRPAVIFMRDLPDGVGFWAVVDGQYLLDLMRAISSTH
RYHFSMAFSDGAPISFGDPQIAASGWFEPLIYEARSNRYPLSVTLIASPTELISAWRQVI
FIIMPMAAIFSVLLMMLTANWLRRRISWRDEIRRAIICGQFRAHYQPVYDNRLQRCSGAE
VLLRWTTSDGNGVRPDIFIGAAEAEGMIVPLTRHLLDLIAEDVQSWQVDPHFHLAINVAA
EHLQHPDFVRDMLQFADKIKDKQFVITLELTERSLIKEGEAVARKLEQLRHAGMKVAIDD
FGTGHCSLSYLQTFTLDYLKIDRGFINAIESLEGETPVLDAIINLSHSLALEVLGEGVET
ELQFCYLQQRGVVFIQGFYYARPMDNTSLAEWLARQGDQRVLADPCHV