Protein Info for IAI47_01230 in Pantoea sp. MT58

Annotation: K(+)-transporting ATPase subunit F

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 29 transmembrane" amino acids 6 to 24 (19 residues), see Phobius details TIGR02115: K+-transporting ATPase, F subunit" amino acids 6 to 29 (24 residues), 36.8 bits, see alignment E=1.3e-13 PF09604: Potass_KdpF" amino acids 6 to 29 (24 residues), 28.6 bits, see alignment E=5.4e-11

Best Hits

Swiss-Prot: 79% identical to KDPF_ECOLI: Potassium-transporting ATPase KdpF subunit (kdpF) from Escherichia coli (strain K12)

KEGG orthology group: None (inferred from 100% identity to pva:Pvag_3069)

MetaCyc: 79% identical to K+ transporting P-type ATPase subunit KdpF (Escherichia coli K-12 substr. MG1655)
TRANS-RXN-2 [EC: 7.2.2.6]

Predicted SEED Role

No annotation

Isozymes

No predicted isozymes

Use Curated BLAST to search for 7.2.2.6

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (29 amino acids)

>IAI47_01230 K(+)-transporting ATPase subunit F (Pantoea sp. MT58)
MSVGVITGIVLVVLLLGYLIYALLNAEAF