Protein Info for IAI47_00855 in Pantoea sp. MT58
Annotation: cell division protein FtsN
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
Swiss-Prot: 55% identical to FTSN_ECOLI: Cell division protein FtsN (ftsN) from Escherichia coli (strain K12)
KEGG orthology group: K03591, cell division protein FtsN (inferred from 89% identity to pva:Pvag_3146)MetaCyc: 55% identical to cell division protein FtsN (Escherichia coli K-12 substr. MG1655)
Predicted SEED Role
"Cell division protein FtsN" in subsystem Bacterial Cytoskeleton
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
Find the best match in UniProt
Protein Sequence (328 amino acids)
>IAI47_00855 cell division protein FtsN (Pantoea sp. MT58) MAQKDYVGRGRSTGTRRKKSPSRGKKSKGGSGTSKLMIVLAVAVLVTFAGGLWFLAHHKK EDVPVITDHKANGNGLPPKPEERWKYIKELENRQVTVPTPIEPSSGGEVKSQTQLTDEQR QLLEQMQADMRQQPTQLNEVPWNEQTPAQRQQTLQHQQQLQQLQRQQQQVQQQQQVQQQR QQLQAQQQQQRQLQLQQQQQRQQQQQLQRQQQQQQQQQQNVQRQSQPAPVTREPDVQTKP QETAKAKPAEKASSQRWMVQCGSFKGTDQAESVRAGLAFEGFESRITTGGGWNRVVIGPY KDRASADSTLKRLRSSGHSSCIPLSVGG