Protein Info for IAI47_00710 in Pantoea sp. MT58

Annotation: glycosyltransferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 409 PF13439: Glyco_transf_4" amino acids 18 to 206 (189 residues), 38.2 bits, see alignment E=3e-13 PF00534: Glycos_transf_1" amino acids 217 to 381 (165 residues), 108.5 bits, see alignment E=5.6e-35 PF13692: Glyco_trans_1_4" amino acids 227 to 367 (141 residues), 87.6 bits, see alignment E=1.9e-28 PF13524: Glyco_trans_1_2" amino acids 308 to 390 (83 residues), 33.4 bits, see alignment E=8.6e-12

Best Hits

KEGG orthology group: None (inferred from 94% identity to pva:Pvag_3177)

Predicted SEED Role

"glycosyl transferase, group 1"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (409 amino acids)

>IAI47_00710 glycosyltransferase (Pantoea sp. MT58)
MTINKQKILLLDNGREWGGGTNSMLELLKRIDRQKFDITCCFYHNYSRGNDETIEATLNA
LAIPVFFIPQIRQPRWAKFIKEAARALLFFNKKLRKRTIDKVDTHWRIMPNASKINSLLQ
LGKFDTLYMNNQPSTNVEGYLAARSLPVAVVQHCRIDPVLEPRLVNMVNQDCQAVIAVSQ
GVSDTLRRHGVEAERCFTVSNAIDIHQPLPSRLDVRQRFKLSPSTFVFGTIGSLILRKSN
HHILQALGRFKRANPDADWRMVIVGAGPELQHLLQLATAENIQHHVVFTGFQNNALDYLT
AFDTFILASRSEGLPRVVLEAMLVNTAVVGSRVVGTAELISHDETGLLFDYGNVVQLTQH
LTALWQDTDLRQRLINAAAKRVREQYAIENYISGVENILQSVVKKKPHA