Protein Info for IAI47_00700 in Pantoea sp. MT58

Annotation: L-threonine 3-dehydrogenase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 342 TIGR00692: L-threonine 3-dehydrogenase" amino acids 3 to 341 (339 residues), 590.3 bits, see alignment E=5.2e-182 PF08240: ADH_N" amino acids 27 to 135 (109 residues), 115.2 bits, see alignment E=2e-37 PF00107: ADH_zinc_N" amino acids 175 to 304 (130 residues), 100 bits, see alignment E=1.5e-32 PF13602: ADH_zinc_N_2" amino acids 228 to 339 (112 residues), 30.4 bits, see alignment E=1.1e-10

Best Hits

Swiss-Prot: 88% identical to TDH_KLEP7: L-threonine 3-dehydrogenase (tdh) from Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578)

KEGG orthology group: K00060, threonine 3-dehydrogenase [EC: 1.1.1.103] (inferred from 98% identity to pva:Pvag_3179)

MetaCyc: 88% identical to threonine dehydrogenase (Escherichia coli K-12 substr. MG1655)
L-threonine 3-dehydrogenase. [EC: 1.1.1.103]

Predicted SEED Role

"L-threonine 3-dehydrogenase (EC 1.1.1.103)" in subsystem Glycine Biosynthesis or Threonine degradation (EC 1.1.1.103)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 1.1.1.103

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (342 amino acids)

>IAI47_00700 L-threonine 3-dehydrogenase (Pantoea sp. MT58)
MKALAKLKKEEGIWMVTDAPVPEPGHNDLLIKIRKTAICGTDVHIYNWDDWSRKTIPVPM
IVGHEYVGEVVAIGQEVKGFTIGDRVSGEGHITCGHCRNCRAGRTHLCRNTMGVGVNRQG
CFAEYLVIPAFNAFKIPDNISDELAAIFDPFGNAVHTALSFDLVGEDVLISGAGPIGIMA
AAVCRHVGARNVVITDINEYRLELARKMGVTRAVNVANENLRDVMHSLGMTEGFDVGLEM
SGAPPAFRSLLEVMNHGGRIALLGIPPGEMAIDWNQVIFKGLFIKGIYGREMFETWYKMA
ALIQSGLDLTPVITHRFGIDDFQQGFDEMRSGRSGKVILNWN