Protein Info for IAI47_00665 in Pantoea sp. MT58
Annotation: glycosyltransferase
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
Swiss-Prot: 54% identical to YIBD_ECOLI: Uncharacterized glycosyltransferase YibD (yibD) from Escherichia coli (strain K12)
KEGG orthology group: None (inferred from 96% identity to pva:Pvag_3187)MetaCyc: 54% identical to UDP-glucuronate:LPS(HepIII) glycosyltransferase (Escherichia coli K-12 substr. MG1655)
Glucuronosyltransferase. [EC: 2.4.1.17]
Predicted SEED Role
"Glycosyltransferase (EC 2.4.1.-)" (EC 2.4.1.-)
MetaCyc Pathways
- serotonin degradation (3/7 steps found)
KEGG Metabolic Maps
- Androgen and estrogen metabolism
- Anthocyanin biosynthesis
- Ascorbate and aldarate metabolism
- C21-Steroid hormone metabolism
- Carotenoid biosynthesis - General
- Drug metabolism - cytochrome P450
- Drug metabolism - other enzymes
- Flavone and flavonol biosynthesis
- Flavonoid biosynthesis
- Fructose and mannose metabolism
- Glycerolipid metabolism
- Glycosphingolipid biosynthesis - ganglio series
- Glycosphingolipid biosynthesis - globo series
- Glycosphingolipid biosynthesis - lacto and neolacto series
- Glycosylphosphatidylinositol(GPI)-anchor biosynthesis
- High-mannose type N-glycan biosynthesis
- Keratan sulfate biosynthesis
- Lipopolysaccharide biosynthesis
- Metabolism of xenobiotics by cytochrome P450
- N-Glycan biosynthesis
- O-Glycan biosynthesis
- O-Mannosyl glycan biosynthesis
- Pentose and glucuronate interconversions
- Peptidoglycan biosynthesis
- Porphyrin and chlorophyll metabolism
- Retinol metabolism
- Sphingolipid metabolism
- Starch and sucrose metabolism
- Zeatin biosynthesis
Isozymes
Compare fitness of predicted isozymes for: 2.4.1.-
Use Curated BLAST to search for 2.4.1.- or 2.4.1.17
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
Find the best match in UniProt
Protein Sequence (348 amino acids)
>IAI47_00665 glycosyltransferase (Pantoea sp. MT58) MIYDEATPFRSEYNAGADIVMSTSPLLSIITPMYNAGSMFDEFMQALLAQTLTMLEIIIV DDGSTDGSGERADQYAQQHAHIRVIHQENGGVSRARNAGLAIARGKYVTFPDADDTMQPD MYQTLVTLAEADNLDAAQCNAEWFFKHSQRVKPLIPLDRLRSTPVLSGADWLNTALKTHR YMHVVWLGIYRRELIEQHQLQFEPGLHHQDIPWTTEFMLLAKRVRYTEAVLYRYYMHDAS ISNRKRTGERNVEYQRHYLKIARLLEELNHRYRDRVKIYPSFHYQVTHEALSVCHSVRRE PDPRARQAIIADLFTTRTHLRMLRNARGIKQWYQLLLWLARLYRWRNK