Protein Info for HSERO_RS09575 in Herbaspirillum seropedicae SmR1

Annotation: septum formation inhibitor Maf

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 211 TIGR00172: septum formation protein Maf" amino acids 11 to 198 (188 residues), 137 bits, see alignment E=2.6e-44 PF02545: Maf" amino acids 12 to 199 (188 residues), 172.2 bits, see alignment E=5e-55

Best Hits

Swiss-Prot: 70% identical to NTPPB_CUPMC: 7-methyl-GTP pyrophosphatase (Rmet_2434) from Cupriavidus metallidurans (strain ATCC 43123 / DSM 2839 / NBRC 102507 / CH34)

KEGG orthology group: K06287, septum formation protein (inferred from 100% identity to hse:Hsero_1919)

Predicted SEED Role

"FIG146278: Maf/YceF/YhdE family protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See D8IS83 at UniProt or InterPro

Protein Sequence (211 amino acids)

>HSERO_RS09575 septum formation inhibitor Maf (Herbaspirillum seropedicae SmR1)
MSHSHFTAPTTRLILGSSSVYRKQLLERLGLPFETMTPDIDETPQAGETPEATALRLARA
KAAAIAARAGAALVIGSDQVATLDGQQIGKPGNHANALRQLQMMRGREVIFHTALCLWDG
RRTDAAQAAQLCNVQTLVRMRDLSDAELDAYLHIEQPYDCAGSAKNEGLGIAILESIRSD
DPTALTGLPLIALTTMLRQAGVGFFGLTAPQ