Gene info for HMPREF1078_RS19910 in Parabacteroides merdae CL09T00C40

Annotation: UDP-2,3-diacylglucosamine diphosphatase
Type 7: Pseudogene derived from a protein-coding gene
Located on scaffold NZ_JH976527, - strand, nucleotides 122,482 to 122,631
See nucleotide sequence around HMPREF1078_RS19910 or for all of scaffold NZ_JH976527

Nearby Genes

500 ntHMPREF1078_RS11005 and HMPREF1078_RS11010 are separated by 9 nucleotidesHMPREF1078_RS11010 and HMPREF1078_RS11015 are separated by 218 nucleotidesHMPREF1078_RS11015 and HMPREF1078_RS11020 are separated by 63 nucleotidesHMPREF1078_RS11020 and HMPREF1078_RS11025 are separated by 136 nucleotidesHMPREF1078_RS11025 and HMPREF1078_RS19910 overlap by 4 nucleotidesHMPREF1078_RS19910 and HMPREF1078_RS11030 are separated by 196 nucleotidesHMPREF1078_RS11030 and HMPREF1078_RS11035 are separated by 215 nucleotidesHMPREF1078_RS11035 and HMPREF1078_RS11040 are separated by 173 nucleotidesHMPREF1078_RS11040 and HMPREF1078_RS19635 overlap by 8 nucleotidesHMPREF1078_RS19635 and HMPREF1078_RS11045 are separated by 590 nucleotides HMPREF1078_RS11005: HMPREF1078_RS11005 - tetratricopeptide repeat protein, at 113,546 to 116,545 _RS11005 HMPREF1078_RS11010: HMPREF1078_RS11010 - hypothetical protein, at 116,555 to 118,306 _RS11010 HMPREF1078_RS11015: HMPREF1078_RS11015 - MATE family efflux transporter, at 118,525 to 119,853 _RS11015 HMPREF1078_RS11020: HMPREF1078_RS11020 - O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase, at 119,917 to 121,194 _RS11020 HMPREF1078_RS11025: HMPREF1078_RS11025 - glycosyltransferase family protein, at 121,331 to 122,485 _RS11025 HMPREF1078_RS19910: HMPREF1078_RS19910 - UDP-2,3-diacylglucosamine diphosphatase, at 122,482 to 122,631 _RS19910 HMPREF1078_RS11030: HMPREF1078_RS11030 - elongation factor G, at 122,828 to 124,984 _RS11030 HMPREF1078_RS11035: HMPREF1078_RS11035 - radical SAM family heme chaperone HemW, at 125,200 to 126,327 _RS11035 HMPREF1078_RS11040: HMPREF1078_RS11040 - zeta toxin family protein, at 126,501 to 127,076 _RS11040 HMPREF1078_RS19635: HMPREF1078_RS19635 - hypothetical protein, at 127,069 to 127,239 _RS19635 HMPREF1078_RS11045: HMPREF1078_RS11045 - hypothetical protein, at 127,830 to 128,189 _RS11045
Locus Name Description Strand Phenotype
HMPREF1078_RS11005 HMPREF1078_RS11005 tetratricopeptide repeat protein + strong
HMPREF1078_RS11010 HMPREF1078_RS11010 hypothetical protein + strong
HMPREF1078_RS11015 HMPREF1078_RS11015 MATE family efflux transporter + insig.
HMPREF1078_RS11020 HMPREF1078_RS11020 O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase + insig.
HMPREF1078_RS11025 HMPREF1078_RS11025 glycosyltransferase family protein - insig.
HMPREF1078_RS19910 HMPREF1078_RS19910 UDP-2,3-diacylglucosamine diphosphatase - insig.
HMPREF1078_RS11030 HMPREF1078_RS11030 elongation factor G - sig.
HMPREF1078_RS11035 HMPREF1078_RS11035 radical SAM family heme chaperone HemW + cofit
HMPREF1078_RS11040 HMPREF1078_RS11040 zeta toxin family protein + strong
HMPREF1078_RS19635 HMPREF1078_RS19635 hypothetical protein + no data
HMPREF1078_RS11045 HMPREF1078_RS11045 hypothetical protein - insig.

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