Gene info for HMPREF1078_RS18645 in Parabacteroides merdae CL09T00C40

Annotation: transposase
Type 7: Pseudogene derived from a protein-coding gene
Located on scaffold NZ_JH976526, + strand, nucleotides 202,510 to 202,638
See nucleotide sequence around HMPREF1078_RS18645 or for all of scaffold NZ_JH976526

Nearby Genes

500 ntHMPREF1078_RS08155 and HMPREF1078_RS08160 overlap by 47 nucleotidesHMPREF1078_RS08160 and HMPREF1078_RS19865 overlap by 65 nucleotidesHMPREF1078_RS19865 and HMPREF1078_RS08165 are separated by 118 nucleotidesHMPREF1078_RS08165 and HMPREF1078_RS19560 are separated by 177 nucleotidesHMPREF1078_RS19560 and HMPREF1078_RS18645 are separated by 128 nucleotidesHMPREF1078_RS18645 and HMPREF1078_RS08170 are separated by 210 nucleotidesHMPREF1078_RS08170 and HMPREF1078_RS08175 are separated by 54 nucleotidesHMPREF1078_RS08175 and HMPREF1078_RS08180 are separated by 16 nucleotidesHMPREF1078_RS08180 and HMPREF1078_RS08185 are separated by 21 nucleotidesHMPREF1078_RS08185 and HMPREF1078_RS08190 are separated by 13 nucleotides HMPREF1078_RS08155: HMPREF1078_RS08155 - IS5 family transposase, at 200,801 to 201,265 _RS08155 HMPREF1078_RS08160: HMPREF1078_RS08160 - transposase, at 201,219 to 201,506 _RS08160 HMPREF1078_RS19865: HMPREF1078_RS19865 - hypothetical protein, at 201,442 to 201,696 _RS19865 HMPREF1078_RS08165: HMPREF1078_RS08165 - helix-turn-helix domain-containing protein, at 201,815 to 202,027 _RS08165 HMPREF1078_RS19560: HMPREF1078_RS19560 - Ppx/GppA family phosphatase, at 202,205 to 202,381 _RS19560 HMPREF1078_RS18645: HMPREF1078_RS18645 - transposase, at 202,510 to 202,638 _RS18645 HMPREF1078_RS08170: HMPREF1078_RS08170 - methylglyoxal synthase, at 202,849 to 203,385 _RS08170 HMPREF1078_RS08175: HMPREF1078_RS08175 - arginase family protein, at 203,440 to 204,249 _RS08175 HMPREF1078_RS08180: HMPREF1078_RS08180 - alpha-glucan family phosphorylase, at 204,266 to 206,824 _RS08180 HMPREF1078_RS08185: HMPREF1078_RS08185 - cation:proton antiporter, at 206,846 to 209,092 _RS08185 HMPREF1078_RS08190: HMPREF1078_RS08190 - 6-phosphofructokinase, at 209,106 to 210,089 _RS08190
Locus Name Description Strand Phenotype
HMPREF1078_RS08155 HMPREF1078_RS08155 IS5 family transposase - insig.
HMPREF1078_RS08160 HMPREF1078_RS08160 transposase - insig.
HMPREF1078_RS19865 HMPREF1078_RS19865 hypothetical protein - insig.
HMPREF1078_RS08165 HMPREF1078_RS08165 helix-turn-helix domain-containing protein - insig.
HMPREF1078_RS19560 HMPREF1078_RS19560 Ppx/GppA family phosphatase + insig.
HMPREF1078_RS18645 HMPREF1078_RS18645 transposase + insig.
HMPREF1078_RS08170 HMPREF1078_RS08170 methylglyoxal synthase - insig.
HMPREF1078_RS08175 HMPREF1078_RS08175 arginase family protein - insig.
HMPREF1078_RS08180 HMPREF1078_RS08180 alpha-glucan family phosphorylase - insig.
HMPREF1078_RS08185 HMPREF1078_RS08185 cation:proton antiporter - insig.
HMPREF1078_RS08190 HMPREF1078_RS08190 6-phosphofructokinase - insig.

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