Gene info for HMPREF1058_RS20345 in Phocaeicola vulgatus CL09T03C04

Annotation: helix-turn-helix domain-containing protein
Type 7: Pseudogene derived from a protein-coding gene
Located on scaffold NZ_JH724282, + strand, nucleotides 35,868 to 36,080
See nucleotide sequence around HMPREF1058_RS20345 or for all of scaffold NZ_JH724282

Nearby Genes

500 ntHMPREF1058_RS19010 and HMPREF1058_RS19005 are separated by 145 nucleotidesHMPREF1058_RS19005 and HMPREF1058_RS19000 are separated by 6 nucleotidesHMPREF1058_RS19000 and HMPREF1058_RS18995 are separated by 246 nucleotidesHMPREF1058_RS18995 and HMPREF1058_RS18990 are separated by 2 nucleotidesHMPREF1058_RS18990 and HMPREF1058_RS20345 are separated by 16 nucleotidesHMPREF1058_RS20345 and HMPREF1058_RS20350 are separated by 237 nucleotidesHMPREF1058_RS20350 and HMPREF1058_RS18980 are separated by 21 nucleotidesHMPREF1058_RS18980 and HMPREF1058_RS18975 are separated by 19 nucleotidesHMPREF1058_RS18975 and HMPREF1058_RS18970 are separated by 614 nucleotidesHMPREF1058_RS18970 and HMPREF1058_RS18960 are separated by 251 nucleotides HMPREF1058_RS19010: HMPREF1058_RS19010 - M48 family metallopeptidase, at 33,155 to 33,940 _RS19010 HMPREF1058_RS19005: HMPREF1058_RS19005 - HigA family addiction module antidote protein, at 34,086 to 34,430 _RS19005 HMPREF1058_RS19000: HMPREF1058_RS19000 - type II toxin-antitoxin system RelE/ParE family toxin, at 34,437 to 34,754 _RS19000 HMPREF1058_RS18995: HMPREF1058_RS18995 - hypothetical protein, at 35,001 to 35,255 _RS18995 HMPREF1058_RS18990: HMPREF1058_RS18990 - hypothetical protein, at 35,258 to 35,851 _RS18990 HMPREF1058_RS20345: HMPREF1058_RS20345 - helix-turn-helix domain-containing protein, at 35,868 to 36,080 _RS20345 HMPREF1058_RS20350: HMPREF1058_RS20350 - hypothetical protein, at 36,318 to 36,506 _RS20350 HMPREF1058_RS18980: HMPREF1058_RS18980 - SGNH/GDSL hydrolase family protein, at 36,528 to 37,451 _RS18980 HMPREF1058_RS18975: HMPREF1058_RS18975 - prolyl oligopeptidase family serine peptidase, at 37,471 to 39,582 _RS18975 HMPREF1058_RS18970: HMPREF1058_RS18970 - hypothetical protein, at 40,197 to 40,589 _RS18970 HMPREF1058_RS18960: HMPREF1058_RS18960 - hypothetical protein, at 40,841 to 41,044 _RS18960
Locus Name Description Strand Phenotype
HMPREF1058_RS19010 HMPREF1058_RS19010 M48 family metallopeptidase + sig.
HMPREF1058_RS19005 HMPREF1058_RS19005 HigA family addiction module antidote protein - no data
HMPREF1058_RS19000 HMPREF1058_RS19000 type II toxin-antitoxin system RelE/ParE family toxin - insig.
HMPREF1058_RS18995 HMPREF1058_RS18995 hypothetical protein - sig.
HMPREF1058_RS18990 HMPREF1058_RS18990 hypothetical protein - insig.
HMPREF1058_RS20345 HMPREF1058_RS20345 helix-turn-helix domain-containing protein + no data
HMPREF1058_RS20350 HMPREF1058_RS20350 hypothetical protein - insig.
HMPREF1058_RS18980 HMPREF1058_RS18980 SGNH/GDSL hydrolase family protein - sig.
HMPREF1058_RS18975 HMPREF1058_RS18975 prolyl oligopeptidase family serine peptidase - sig.
HMPREF1058_RS18970 HMPREF1058_RS18970 hypothetical protein - insig.
HMPREF1058_RS18960 HMPREF1058_RS18960 hypothetical protein - sig.

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