Protein Info for HMPREF1058_RS17515 in Phocaeicola vulgatus CL09T03C04

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 743 signal peptide" amino acids 1 to 21 (21 residues), see Phobius details PF18961: DUF5703_N" amino acids 26 to 306 (281 residues), 376.5 bits, see alignment E=5.3e-117

Best Hits

KEGG orthology group: None (inferred from 100% identity to bvu:BVU_2698)

Predicted SEED Role

"FIG00655893: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See I9A620 at UniProt or InterPro

Protein Sequence (743 amino acids)

>HMPREF1058_RS17515 hypothetical protein (Phocaeicola vulgatus CL09T03C04)
MKNIFTFLLLVFIGGQFLWGQPANLVWNTQSRNASESMPCGGGDIGMNVWVENDDVLFYL
SRSGSFDENNCLLKQGRFRVRLTPNPFAGTASFRQTLHLNDGYVSVSSDNATLIIWVDVF
HPVVHVEVKTKELTSMRVNFESWRYEDRPVRKGEGQQCSYKWAIPDGLMTRRDSVCVEED
NFTFFHRNPERTIFDVVVDQQGMNEVKEQLYNPLKNLIFGGRLSGDNLVYNGTRRGHYAG
TEYLAWMYKSKKPTYKQSARIVLNTEQSTVPAWEASLARTEKEINVSKDKQATRRWWNDF
WKRSFIEGEGEAGDAIRNYTLFRYMLGCNAYSQWPTKFNGGLFTFDPMYVDQKMEFTPDF
RKWGGGTMTAQNQRLVYWPMLKSGDFDLMKSQFDFYLRLLPTAEARTRTYWGHAGACFTE
QMENFGLPNPAEYGFKRPESYDRGLEYNAWLEYEWDTVLEFCQMILETARYNEADISRYI
PLIESSLNFFDEHYRQLALQRGRKDLDGNGKLVIYPGSACETYKMAYNPSSTIAALRSVL
QTYGRKPDMLARIPEIPLRIVDGKEMIAPAQAWERVNNIETPQLYAVFPWRMYGVGKEGL
EIARNTYLYDPDAQKFRSHTGWKQDNIWAACLGMTEEAAQLTLQKMANGPHRFPAFWGPG
YDWTPDHNWGGSGMIGMQEMLLQEADGKILLFPAWPKDWDVHFKLHATGQTTVEAVLKGG
TVVGLTVLPKEREKDVVNCLLNK