Protein Info for HMPREF1058_RS16185 in Phocaeicola vulgatus CL09T03C04

Annotation: undecaprenyl-phosphate glucose phosphotransferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 473 transmembrane" amino acids 12 to 33 (22 residues), see Phobius details amino acids 52 to 73 (22 residues), see Phobius details amino acids 88 to 109 (22 residues), see Phobius details amino acids 117 to 138 (22 residues), see Phobius details amino acids 287 to 313 (27 residues), see Phobius details TIGR03025: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase" amino acids 24 to 473 (450 residues), 391.2 bits, see alignment E=8.3e-121 TIGR03023: undecaprenyl-phosphate glucose phosphotransferase" amino acids 46 to 473 (428 residues), 425.1 bits, see alignment E=4.8e-131 PF13727: CoA_binding_3" amino acids 75 to 245 (171 residues), 78.5 bits, see alignment E=6.5e-26 PF02397: Bac_transf" amino acids 282 to 466 (185 residues), 219.1 bits, see alignment E=3.3e-69

Best Hits

KEGG orthology group: None (inferred from 100% identity to bvu:BVU_2406)

Predicted SEED Role

"Glycosyltransferase"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See I9A2A6 at UniProt or InterPro

Protein Sequence (473 amino acids)

>HMPREF1058_RS16185 undecaprenyl-phosphate glucose phosphotransferase (Phocaeicola vulgatus CL09T03C04)
MTMKDKLASYNHLIETFVIVTETFLCGLLFLLFSKLSNEMQWDSLQVGGTTVLQVMLTLM
LCYALCAIHSGVVLHRRKVHSLQIWKRVFENMFLFVLLGGLVLSVGNYADIASLFMLEYL
FLLFLCLVSFRFTLRLLIRLYRMSKKHTRFVVLVGSTDNNLEIYHEMSGSEDTGYSVVGY
FDGQANPAFPVECPYLGQPAQVQEYLEKHDYVHYLFCCLPSKDREVIVSLIDYCENHLVH
FFSVPNVRNYLHHRMSFNIMGNVPYLGLRPDPLSWPGNRLLKRTFDIVVSSVFLCTLFPV
ILIVVAIVTGLTMPGPLFFRQKRNGLNGREFYCYKFRSMKVNADADRIQATEHDPRKTRW
GNIMRKTNIDELPQFINVLLGDMSIVGPRPHMLLHTQEYSRLINKYMVRHFVKPGITGWS
QVTGFRGETKELKDMEGRIRGDIWYLEHWSFGLDLYIMYRTVANVFRGEKNAY