Protein Info for HMPREF1058_RS10900 in Phocaeicola vulgatus CL09T03C04

Annotation: glycosyltransferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 315 transmembrane" amino acids 230 to 251 (22 residues), see Phobius details amino acids 263 to 288 (26 residues), see Phobius details PF13641: Glyco_tranf_2_3" amino acids 4 to 172 (169 residues), 30.4 bits, see alignment E=5.3e-11 PF00535: Glycos_transf_2" amino acids 6 to 164 (159 residues), 116.5 bits, see alignment E=1.9e-37 PF10111: Glyco_tranf_2_2" amino acids 6 to 105 (100 residues), 28.5 bits, see alignment E=1.7e-10

Best Hits

Swiss-Prot: 46% identical to Y501_SYNY3: Uncharacterized glycosyltransferase sll0501 (sll0501) from Synechocystis sp. (strain PCC 6803 / Kazusa)

KEGG orthology group: None (inferred from 100% identity to bvu:BVU_1076)

MetaCyc: 41% identical to CPS-53 (KpLE1) prophage; bactoprenol glucosyl transferase (Escherichia coli K-12 substr. MG1655)
Phosphopolyprenol glucosyltransferase. [EC: 2.4.1.78]

Predicted SEED Role

"Glycosyltransferase"

Isozymes

No predicted isozymes

Use Curated BLAST to search for 2.4.1.78

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See I9J0D2 at UniProt or InterPro

Protein Sequence (315 amino acids)

>HMPREF1058_RS10900 glycosyltransferase (Phocaeicola vulgatus CL09T03C04)
MKKVTLLIPVYNEEAMLPTLYQRLIELVNRNAVYEWEILFVNDGSSDTTLECLRRLRQQD
KRVNYVNLSRNFGKEVAMLAGFDYATGDCCVVMDADLQDPPELVDQMLEYWEEGYDDIYA
KRRTRGEESWLRRQFSLAFYGILQRMSRIDILPNVGDFRLLDRRCVLTLRRLRECERYTK
GLFCWIGYQKKSIEFDRGDRLMGHSSWNFLKLLNLAVEGITSFSIAPLRIATVCGVLCSI
SSFIYAIYFLIKTVLYGDETAGFPTLIIVMLFLGGIQLFSLGIIGEYVGRIFKETKGRPT
YIASDYNEEKLGYDR