Protein Info for HMPREF1058_RS10875 in Phocaeicola vulgatus CL09T03C04

Annotation: glycosyltransferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 310 PF00535: Glycos_transf_2" amino acids 9 to 117 (109 residues), 37.4 bits, see alignment E=2.5e-13

Best Hits

KEGG orthology group: None (inferred from 100% identity to bvu:BVU_1071)

Predicted SEED Role

"Putative N-acetylgalactosaminyl-diphosphoundecaprenol glucuronosyltransferase" in subsystem Teichuronic acid biosynthesis

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See I9J0D5 at UniProt or InterPro

Protein Sequence (310 amino acids)

>HMPREF1058_RS10875 glycosyltransferase (Phocaeicola vulgatus CL09T03C04)
MEQIKKLAIVIPAYKGRFLKETLDSIAVQAHKDEFVLYIGDDASPERLDKIVESYQNKVN
LVYHRFSENMGGKDLVAHWERCIQLSAEPFIWLFSDDDLMPADGVERVMEALSRPHHQRG
YFFRFPLAVIDGENKRIRANRPLEEGSVSCYRLLLDKLQGKIDSAAVEYVFSREIWQSAG
GFVHFPMAWCSDDATWAAFARHAGGVISLPGQPVCWRNVEGANISNSAGHDKDKLHATIL
FLRWMRNMFSDYVDDPELISALQCYIHTILRISLHKHYNICGLWGVSMALGRFNKRAAFT
TFFRNFRLFS