Protein Info for HMPREF1058_RS06625 in Phocaeicola vulgatus CL09T03C04

Annotation: undecaprenyl-phosphate glucose phosphotransferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 467 transmembrane" amino acids 12 to 35 (24 residues), see Phobius details amino acids 50 to 70 (21 residues), see Phobius details amino acids 82 to 104 (23 residues), see Phobius details amino acids 110 to 130 (21 residues), see Phobius details amino acids 281 to 303 (23 residues), see Phobius details TIGR03025: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase" amino acids 19 to 467 (449 residues), 431.5 bits, see alignment E=5e-133 TIGR03023: undecaprenyl-phosphate glucose phosphotransferase" amino acids 20 to 467 (448 residues), 463.8 bits, see alignment E=8.7e-143 PF13727: CoA_binding_3" amino acids 65 to 239 (175 residues), 100.1 bits, see alignment E=1.6e-32 PF02397: Bac_transf" amino acids 276 to 460 (185 residues), 232.1 bits, see alignment E=3.5e-73

Best Hits

KEGG orthology group: None (inferred from 100% identity to bvu:BVU_3948)

Predicted SEED Role

"Glycosyltransferase"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See I9ITJ5 at UniProt or InterPro

Protein Sequence (467 amino acids)

>HMPREF1058_RS06625 undecaprenyl-phosphate glucose phosphotransferase (Phocaeicola vulgatus CL09T03C04)
MKQPTTENSDIIKLVAILGDFALLNLSMILVFFILKGIDSQAIAHISLKTYLLTSNLCYI
PCISIFGVILHNRIVRPEQIVGRLLGTISLHVVIFLTVLAIIKVDNFSRIYLLAFYLSFI
PLAIGWRLTLRFFVKMFRRSGRNLHTTVLIGDGDNMVELYHTLNDLTYGYRVLGIFYDEK
DSNYPEGIPFKGPVNQLFEWLSHNTVHELYCGLPSSRKDDILAIMNYCENNLIRFYSVPH
VRNYIKRQLQLELLGEVPVLSIRTEPLQNPVNRLAKRLFDLTFSSLFLLTIFPFMYLIVG
LIIKITSPGPIFFKQERNGENGKIFKCYKFRSMKVNALSDSLQATKNDPRKTKFGNFLRK
SNLDELPQFINVFKGEMSIVGPRPHMLKHTEEYSQLINKYMMRHLVKPGITGWAQVTGYR
GETKELSQMEGRVRRDLWYIENWTFLLDIRIMIKTVTNMFRGEKNAY