Protein Info for HMPREF1058_RS04795 in Phocaeicola vulgatus CL09T03C04

Annotation: ankyrin repeat domain-containing protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 324 PF12796: Ank_2" amino acids 7 to 65 (59 residues), 50 bits, see alignment E=9.1e-17 amino acids 62 to 131 (70 residues), 42.9 bits, see alignment E=1.6e-14 amino acids 115 to 187 (73 residues), 36.8 bits, see alignment E=1.2e-12 amino acids 194 to 257 (64 residues), 43 bits, see alignment E=1.4e-14 amino acids 249 to 323 (75 residues), 56.6 bits, see alignment E=7.9e-19 PF13637: Ank_4" amino acids 8 to 57 (50 residues), 40.1 bits, see alignment 8.6e-14 amino acids 51 to 86 (36 residues), 26.8 bits, see alignment 1.3e-09 amino acids 72 to 123 (52 residues), 29.5 bits, see alignment 1.9e-10 amino acids 201 to 244 (44 residues), 38 bits, see alignment 3.9e-13 amino acids 272 to 318 (47 residues), 28.7 bits, see alignment 3.3e-10 PF13857: Ank_5" amino acids 24 to 75 (52 residues), 39.4 bits, see alignment 1.5e-13 PF13606: Ank_3" amino acids 36 to 64 (29 residues), 29.9 bits, see alignment (E = 1e-10) amino acids 71 to 97 (27 residues), 22.3 bits, see alignment (E = 3.2e-08) amino acids 164 to 186 (23 residues), 18.9 bits, see alignment (E = 3.9e-07) amino acids 198 to 226 (29 residues), 20.6 bits, see alignment (E = 1.1e-07) amino acids 264 to 292 (29 residues), 18.5 bits, see alignment (E = 5.6e-07) PF00023: Ank" amino acids 37 to 68 (32 residues), 33.6 bits, see alignment 7.9e-12 amino acids 72 to 101 (30 residues), 27.6 bits, see alignment (E = 6.3e-10) amino acids 164 to 187 (24 residues), 25.5 bits, see alignment (E = 2.9e-09) amino acids 199 to 226 (28 residues), 25.4 bits, see alignment (E = 3.1e-09) amino acids 231 to 262 (32 residues), 16.2 bits, see alignment 2.7e-06 amino acids 264 to 296 (33 residues), 31.1 bits, see alignment 5e-11

Best Hits

KEGG orthology group: None (inferred from 81% identity to bsa:Bacsa_0441)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See I9IPY3 at UniProt or InterPro

Protein Sequence (324 amino acids)

>HMPREF1058_RS04795 ankyrin repeat domain-containing protein (Phocaeicola vulgatus CL09T03C04)
MDNNMTFLNACRNGQKSIVQIFLQKGGINVNKRDAEGNTPLHYACLKGFRDIVNMLLEHD
ADVSVANNCAETPLHAAARSGNKEIIGKLIQYGADQDATDKDGRTSLICLLDNKRTDAAL
FLIEQGADTEMADNTGHKAIDYATVHGLCEVVACLSAEGTTDAHGNTPLHQAVFNGQSET
VRMLLSASDDMLDMANDEGETPLIIACMKGNLHIVDLLIAAGSEVNKALLNGNTPMHFAA
WSGNSFIGRKLIAANAQMDMRNENGETPLILAAREGNNEFTALLVEHGADVNLADNLQRT
ALYYASERGYNEITEMLLTAGAEG