Gene info for HMPREF1058_RS0119730 in Phocaeicola vulgatus CL09T03C04

Annotation: response regulator transcription factor
Type 7: Pseudogene derived from a protein-coding gene
Located on scaffold NZ_JH724284, - strand, nucleotides 120,163 to 121,154
See nucleotide sequence around HMPREF1058_RS0119730 or for all of scaffold NZ_JH724284

Nearby Genes

500 ntHMPREF1058_RS07860 and HMPREF1058_RS20840 are separated by 237 nucleotidesHMPREF1058_RS20840 and HMPREF1058_RS07855 are separated by 88 nucleotidesHMPREF1058_RS07855 and HMPREF1058_RS07850 are separated by 280 nucleotidesHMPREF1058_RS07850 and HMPREF1058_RS07845 are separated by 22 nucleotidesHMPREF1058_RS07845 and HMPREF1058_RS0119730 are separated by 225 nucleotidesHMPREF1058_RS0119730 and HMPREF1058_RS07840 are separated by 252 nucleotidesHMPREF1058_RS07840 and HMPREF1058_RS07835 are separated by 3 nucleotidesHMPREF1058_RS07835 and HMPREF1058_RS07830 are separated by 239 nucleotidesHMPREF1058_RS07830 and HMPREF1058_RS07825 are separated by 29 nucleotidesHMPREF1058_RS07825 and HMPREF1058_RS07820 are separated by 279 nucleotides HMPREF1058_RS07860: HMPREF1058_RS07860 - DUF1573 domain-containing protein, at 115,747 to 116,103 _RS07860 HMPREF1058_RS20840: HMPREF1058_RS20840 - NVEALA domain-containing protein, at 116,341 to 116,589 _RS20840 HMPREF1058_RS07855: HMPREF1058_RS07855 - 6-bladed beta-propeller, at 116,678 to 117,772 _RS07855 HMPREF1058_RS07850: HMPREF1058_RS07850 - hypothetical protein, at 118,053 to 119,669 _RS07850 HMPREF1058_RS07845: HMPREF1058_RS07845 - S26 family signal peptidase, at 119,692 to 119,937 _RS07845 HMPREF1058_RS0119730: HMPREF1058_RS0119730 - response regulator transcription factor, at 120,163 to 121,154 _RS0119730 HMPREF1058_RS07840: HMPREF1058_RS07840 - hypothetical protein, at 121,407 to 121,628 _RS07840 HMPREF1058_RS07835: HMPREF1058_RS07835 - DUF1573 domain-containing protein, at 121,632 to 122,495 _RS07835 HMPREF1058_RS07830: HMPREF1058_RS07830 - NVEALA domain-containing protein, at 122,735 to 122,962 _RS07830 HMPREF1058_RS07825: HMPREF1058_RS07825 - DUF4221 family protein, at 122,992 to 124,155 _RS07825 HMPREF1058_RS07820: HMPREF1058_RS07820 - NVEALA domain-containing protein, at 124,435 to 124,671 _RS07820
Locus Name Description Strand Phenotype
HMPREF1058_RS07860 HMPREF1058_RS07860 DUF1573 domain-containing protein + insig.
HMPREF1058_RS20840 HMPREF1058_RS20840 NVEALA domain-containing protein + sig.
HMPREF1058_RS07855 HMPREF1058_RS07855 6-bladed beta-propeller + insig.
HMPREF1058_RS07850 HMPREF1058_RS07850 hypothetical protein + insig.
HMPREF1058_RS07845 HMPREF1058_RS07845 S26 family signal peptidase + insig.
HMPREF1058_RS0119730 HMPREF1058_RS0119730 response regulator transcription factor - insig.
HMPREF1058_RS07840 HMPREF1058_RS07840 hypothetical protein + sig.
HMPREF1058_RS07835 HMPREF1058_RS07835 DUF1573 domain-containing protein + strong
HMPREF1058_RS07830 HMPREF1058_RS07830 NVEALA domain-containing protein + no data
HMPREF1058_RS07825 HMPREF1058_RS07825 DUF4221 family protein + strong
HMPREF1058_RS07820 HMPREF1058_RS07820 NVEALA domain-containing protein + insig.

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