Gene info for HMPREF1058_RS0119435 in Phocaeicola vulgatus CL09T03C04

Annotation: IS982 family transposase
Type 7: Pseudogene derived from a protein-coding gene
Located on scaffold NZ_JH724282, - strand, nucleotides 1,230,205 to 1,230,984
See nucleotide sequence around HMPREF1058_RS0119435 or for all of scaffold NZ_JH724282

Nearby Genes

500 ntHMPREF1058_RS14355 and HMPREF1058_RS0119430 are separated by 194 nucleotidesHMPREF1058_RS0119430 and HMPREF1058_RS14350 are separated by 189 nucleotidesHMPREF1058_RS14350 and HMPREF1058_RS14345 are separated by 161 nucleotidesHMPREF1058_RS14345 and HMPREF1058_RS14340 are separated by 21 nucleotidesHMPREF1058_RS14340 and HMPREF1058_RS0119435 are separated by 595 nucleotidesHMPREF1058_RS0119435 and HMPREF1058_RS14335 are separated by 379 nucleotidesHMPREF1058_RS14335 and HMPREF1058_RS14330 are separated by 12 nucleotidesHMPREF1058_RS14330 and HMPREF1058_RS14325 are separated by 3 nucleotidesHMPREF1058_RS14325 and HMPREF1058_RS14320 are separated by 171 nucleotidesHMPREF1058_RS14320 and HMPREF1058_RS14315 are separated by 183 nucleotides HMPREF1058_RS14355: HMPREF1058_RS14355 - GNAT family N-acetyltransferase, at 1,221,416 to 1,221,877 _RS14355 HMPREF1058_RS0119430: HMPREF1058_RS0119430 - hypothetical protein, at 1,222,072 to 1,222,299 _RS0119430 HMPREF1058_RS14350: HMPREF1058_RS14350 - IS1182 family transposase, at 1,222,489 to 1,224,144 _RS14350 HMPREF1058_RS14345: HMPREF1058_RS14345 - RagB/SusD family nutrient uptake outer membrane protein, at 1,224,306 to 1,226,363 _RS14345 HMPREF1058_RS14340: HMPREF1058_RS14340 - TonB-dependent receptor, at 1,226,385 to 1,229,609 _RS14340 HMPREF1058_RS0119435: HMPREF1058_RS0119435 - IS982 family transposase, at 1,230,205 to 1,230,984 _RS0119435 HMPREF1058_RS14335: HMPREF1058_RS14335 - citrate/2-methylcitrate synthase, at 1,231,364 to 1,232,707 _RS14335 HMPREF1058_RS14330: HMPREF1058_RS14330 - NADP-dependent isocitrate dehydrogenase, at 1,232,720 to 1,233,865 _RS14330 HMPREF1058_RS14325: HMPREF1058_RS14325 - aconitate hydratase, at 1,233,869 to 1,236,112 _RS14325 HMPREF1058_RS14320: HMPREF1058_RS14320 - AAA family ATPase, at 1,236,284 to 1,238,176 _RS14320 HMPREF1058_RS14315: HMPREF1058_RS14315 - thioesterase family protein, at 1,238,360 to 1,238,734 _RS14315
Locus Name Description Strand Phenotype
HMPREF1058_RS14355 HMPREF1058_RS14355 GNAT family N-acetyltransferase + insig.
HMPREF1058_RS0119430 HMPREF1058_RS0119430 hypothetical protein + no data
HMPREF1058_RS14350 HMPREF1058_RS14350 IS1182 family transposase - no data
HMPREF1058_RS14345 HMPREF1058_RS14345 RagB/SusD family nutrient uptake outer membrane protein - insig.
HMPREF1058_RS14340 HMPREF1058_RS14340 TonB-dependent receptor - cofit
HMPREF1058_RS0119435 HMPREF1058_RS0119435 IS982 family transposase - insig.
HMPREF1058_RS14335 HMPREF1058_RS14335 citrate/2-methylcitrate synthase - strong
HMPREF1058_RS14330 HMPREF1058_RS14330 NADP-dependent isocitrate dehydrogenase - strong
HMPREF1058_RS14325 HMPREF1058_RS14325 aconitate hydratase - strong
HMPREF1058_RS14320 HMPREF1058_RS14320 AAA family ATPase + insig.
HMPREF1058_RS14315 HMPREF1058_RS14315 thioesterase family protein - insig.

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