Gene info for HMPREF1058_RS0119340 in Phocaeicola vulgatus CL09T03C04

Annotation: IS1182 family transposase
Type 7: Pseudogene derived from a protein-coding gene
Located on scaffold NZ_JH724282, + strand, nucleotides 400,426 to 402,080
See nucleotide sequence around HMPREF1058_RS0119340 or for all of scaffold NZ_JH724282

Nearby Genes

500 ntHMPREF1058_RS17560 and HMPREF1058_RS21405 are separated by 5 nucleotidesHMPREF1058_RS21405 and HMPREF1058_RS17555 overlap by 28 nucleotidesHMPREF1058_RS17555 and HMPREF1058_RS17550 overlap by 1 nucleotidesHMPREF1058_RS17550 and HMPREF1058_RS21410 overlap by 8 nucleotidesHMPREF1058_RS21410 and HMPREF1058_RS0119340 are separated by 12 nucleotidesHMPREF1058_RS0119340 and HMPREF1058_RS17545 are separated by 120 nucleotidesHMPREF1058_RS17545 and HMPREF1058_RS0119345 are separated by 6 nucleotidesHMPREF1058_RS0119345 and HMPREF1058_RS17540 overlap by 59 nucleotidesHMPREF1058_RS17540 and HMPREF1058_RS17535 are separated by 485 nucleotidesHMPREF1058_RS17535 and HMPREF1058_RS17530 are separated by 11 nucleotides HMPREF1058_RS17560: HMPREF1058_RS17560 - phage integrase SAM-like domain-containing protein, at 397,251 to 398,306 _RS17560 HMPREF1058_RS21405: HMPREF1058_RS21405 - hypothetical protein, at 398,312 to 398,536 _RS21405 HMPREF1058_RS17555: HMPREF1058_RS17555 - hypothetical protein, at 398,509 to 398,727 _RS17555 HMPREF1058_RS17550: HMPREF1058_RS17550 - caspase family protein, at 398,727 to 400,283 _RS17550 HMPREF1058_RS21410: HMPREF1058_RS21410 - hypothetical protein, at 400,276 to 400,413 _RS21410 HMPREF1058_RS0119340: HMPREF1058_RS0119340 - IS1182 family transposase, at 400,426 to 402,080 _RS0119340 HMPREF1058_RS17545: HMPREF1058_RS17545 - hypothetical protein, at 402,201 to 402,674 _RS17545 HMPREF1058_RS0119345: HMPREF1058_RS0119345 - 6-bladed beta-propeller, at 402,681 to 403,445 _RS0119345 HMPREF1058_RS17540: HMPREF1058_RS17540 - 6-bladed beta-propeller, at 403,387 to 403,839 _RS17540 HMPREF1058_RS17535: HMPREF1058_RS17535 - IS21-like element helper ATPase IstB, at 404,325 to 405,113 _RS17535 HMPREF1058_RS17530: HMPREF1058_RS17530 - IS21 family transposase, at 405,125 to 406,690 _RS17530
Locus Name Description Strand Phenotype
HMPREF1058_RS17560 HMPREF1058_RS17560 phage integrase SAM-like domain-containing protein + insig.
HMPREF1058_RS21405 HMPREF1058_RS21405 hypothetical protein + insig.
HMPREF1058_RS17555 HMPREF1058_RS17555 hypothetical protein - insig.
HMPREF1058_RS17550 HMPREF1058_RS17550 caspase family protein - insig.
HMPREF1058_RS21410 HMPREF1058_RS21410 hypothetical protein - no data
HMPREF1058_RS0119340 HMPREF1058_RS0119340 IS1182 family transposase + insig.
HMPREF1058_RS17545 HMPREF1058_RS17545 hypothetical protein - insig.
HMPREF1058_RS0119345 HMPREF1058_RS0119345 6-bladed beta-propeller - insig.
HMPREF1058_RS17540 HMPREF1058_RS17540 6-bladed beta-propeller - insig.
HMPREF1058_RS17535 HMPREF1058_RS17535 IS21-like element helper ATPase IstB - insig.
HMPREF1058_RS17530 HMPREF1058_RS17530 IS21 family transposase - no data

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