Protein Info for HMPREF1058_RS00265 in Phocaeicola vulgatus CL09T03C04

Annotation: glycoside hydrolase family 97 protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 623 signal peptide" amino acids 1 to 22 (22 residues), see Phobius details PF14508: GH97_N" amino acids 26 to 267 (242 residues), 168.2 bits, see alignment E=3.2e-53 PF10566: Glyco_hydro_97" amino acids 272 to 526 (255 residues), 271.4 bits, see alignment E=1.4e-84 PF14509: GH97_C" amino acids 529 to 619 (91 residues), 65.9 bits, see alignment E=4.9e-22

Best Hits

KEGG orthology group: None (inferred from 100% identity to bvu:BVU_0213)

Predicted SEED Role

"Maltodextrin glucosidase (EC 3.2.1.20)" in subsystem Maltose and Maltodextrin Utilization (EC 3.2.1.20)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 3.2.1.20

Use Curated BLAST to search for 3.2.1.20

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See I9IH38 at UniProt or InterPro

Protein Sequence (623 amino acids)

>HMPREF1058_RS00265 glycoside hydrolase family 97 protein (Phocaeicola vulgatus CL09T03C04)
MIMKYFTIIALLCLSCISCTMQNNLLQSPNGKIAIEYHAEKGFSVIYHSGRDKVKMMSLP
EIGLKTSDTDDCFKLISSTPVTSVVDDYEMLTGKRRHCHNEANECTYRFENVKGLRVDLI
FRVYNDGIAFRYHLPKTKEEIVVLDEYTAFAFTPGIKRWTQKFTVGYEGFYWPNTDGVAD
NEGREWSFPTLFQPSDSAFVLLTEANILRDNTGAYLTNAADSSIYKIKLSDERLICPSGW
YSPWRVAIIGTLADIVESTLVTDVSEPCKIQDTQWIKPGLVSWIYWAYNHGSKDYQIVKK
YIDFAADFDLPYMLIDWEWDAMGNGGNLNDAMNYCKEKNVTPLIWYNSSTAWCDPTPLYR
LNTPEVRDKEFEWLKEIGIQGVKIDFFGGDSIGTMNYYIDLLEDAARHKLLVNFHGAAIP
RGWQRTYPNLMSVEAVYGSEWYNNKPTLTDNAAWHNCTLPFTRNVIGPMDYTPCTFTNSQ
HPHITTDAHELALLVIFESALQHLADRPEGYRQQPVEVQNFIRYLPVAWEDTRLLSGYPA
ESVVIARKSKDSWYISGLNGTENTKSFRVNLEFIKDSIQLIQLFSDTTDGKQIKIENSAF
DTKELNIECQPRGGFVVWVKLRK