Protein Info for H281DRAFT_06354 in Paraburkholderia bryophila 376MFSha3.1

Annotation: Sugar phosphate permease

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 440 transmembrane" amino acids 20 to 40 (21 residues), see Phobius details amino acids 48 to 67 (20 residues), see Phobius details amino acids 83 to 102 (20 residues), see Phobius details amino acids 108 to 130 (23 residues), see Phobius details amino acids 142 to 164 (23 residues), see Phobius details amino acids 176 to 195 (20 residues), see Phobius details amino acids 244 to 265 (22 residues), see Phobius details amino acids 280 to 299 (20 residues), see Phobius details amino acids 311 to 328 (18 residues), see Phobius details amino acids 334 to 355 (22 residues), see Phobius details amino acids 365 to 388 (24 residues), see Phobius details amino acids 400 to 419 (20 residues), see Phobius details PF07690: MFS_1" amino acids 21 to 385 (365 residues), 156.4 bits, see alignment E=4.9e-50 amino acids 274 to 429 (156 residues), 36.8 bits, see alignment E=1.1e-13

Best Hits

Swiss-Prot: 46% identical to TUB4_AGRVI: Putative tartrate transporter (ttuB) from Agrobacterium vitis

KEGG orthology group: None (inferred from 95% identity to bgf:BC1003_4351)

Predicted SEED Role

"Nitrate/nitrite transporter" in subsystem Nitrate and nitrite ammonification

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A2Z5MLV3 at UniProt or InterPro

Protein Sequence (440 amino acids)

>H281DRAFT_06354 Sugar phosphate permease (Paraburkholderia bryophila 376MFSha3.1)
MNPIDEAATMRKVYGRLMPLLFAMMFFNYLDRINIGFAALDMNKQLGFSPAVFGFAGSIF
FVGYMLLEVPSNLLLHRVGARRWIARILLTWGAVAAVTAFVFNDTSFYVLRFLLGVMEAG
FLPGVAVYLTKWFPVRYRARAVGGYIIAGSFSAVLGGPISTALMTYADGILGLHGWQWMF
ILEGVPAMLLGLLTLRIMTERPADAEWLSVDEKRWLESTLAAEREALGGNTHFPLMRVAG
DIRVWSLACLFGCALVGIYGLFLWLPQIVKSLGHLTNLEVGFLSAAPPLLGVLGTFLISR
SSDRTGDRKKHLAFVYGMSALAIAGSAYAPNPVIAYVLLCVTGLFIYAGNPLFWSLASSF
RTGAAGAATIALINTIAQFGGLVGPWSIGLVRSATGNFKLALLTIAAFLLVATVIALVMR
VTASEDETQSLAAGDAAPRA