Protein Info for H281DRAFT_06326 in Paraburkholderia bryophila 376MFSha3.1

Annotation: filamentous hemagglutinin family N-terminal domain-containing protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1082 signal peptide" amino acids 1 to 27 (27 residues), see Phobius details PF13018: ESPR" amino acids 1 to 39 (39 residues), 37.4 bits, see alignment (E = 2.7e-13) PF05860: TPS" amino acids 67 to 311 (245 residues), 122.8 bits, see alignment E=2.5e-39 TIGR01901: filamentous hemagglutinin family N-terminal domain" amino acids 101 to 174 (74 residues), 72.5 bits, see alignment 1.1e-24

Best Hits

Predicted SEED Role

"Large exoproteins involved in heme utilization or adhesion"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (1082 amino acids)

>H281DRAFT_06326 filamentous hemagglutinin family N-terminal domain-containing protein (Paraburkholderia bryophila 376MFSha3.1)
MNKNRFRRVFSKRLGMLVAVAENVASQGKQAGESAGVGPSGRELGVVSTMTAMAVALVAF
QPSVSRAQSLPTNGQVMAGQASISQNTNTMTVNQGTQRTVIDWNSFNVGTGNTVQFNQPN
AQAQALNRVTGGGASNIQGSLLANGQVLIQNANGVLFSKGSVVNVGSLLATTKSVDSNAF
MAGGPLSLKSTGTNGSVVNDGAINAQGYVVLMGDQVRNSGAITTAQGGQVALAAGDSAMV
ALPNGQGIQLTLTNASANALVENSGNIKAENGTVLLTARGSNTLLNTVVNLSGVVRAGTV
VADAGNTGDVAVTGKIDASNAAGQGGTVVLSGDRVGVFGNASIDASGATQGGKVIVGGDS
LHKLDGTQAAAMLQDGVQFANFTQVDAGAKIDAGSAHGNGGFVETSGHSLDVQGQVSAAA
PEGKAGEWLIDPTDVNITTAANANEAVAGGTFTPSTNTAKVNNGAINSALNGGTDVTITT
LSSGTATGNIVQESGADITKSAGGNATLTLIANGSISLQGAISSTSGKLSLNATADAGHL
GNGTVHDNANASYDLNGGSLTISGNSTAGNGLAGANAVYLQGNWTNVSGGSITGAANAGA
GVTFAKDFTATGSNTLTVTGTSNAGTGVSLTPGASLTKTGSGLMSITGSSTAGYGVSIGR
PGMSTASSVSVTDNGTLAITGVSNSGLGVYVSGNAVADKSSTLNISGTSQTGPGVGIDST
AIASGYTFSAKIKSSDNATVNIQASSNTGVGFVDYDGALLASQNATINLDANSNTSWGAQ
GAWQSTATDTAHINMNGHGTSGLWYQGAATASGDGVINMTGTGTAGHGVIMPNTTTTDNG
TVNVVGTGTQDGVWERYGANVSGNSAVNVMGTSDSGPGVTITAPNSVSGNGTLTINGDSN
TGTGVSDSSSLNVSGNGAAIISGNSNSGDATVINGSVNVAADGAVNISGQSTNGSGVIVN
PNGSINISGNGAADIGGSSTNGNGAVIDGSLNVTDNGTLNVSGDSANGSGVIVDPNGSIN
ISGNGAADINGTSTNGNGAVIDGSVNVTDNGTANISGNSTNGSGVIVDPNGSINISGNGA
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