Protein Info for H281DRAFT_06064 in Paraburkholderia bryophila 376MFSha3.1
Annotation: acetyl-CoA carboxylase carboxyltransferase subunit beta /acetyl-CoA carboxylase carboxyltransferase subunit alpha
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
Swiss-Prot: 97% identical to ACCD_PARP8: Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta (accD) from Paraburkholderia phymatum (strain DSM 17167 / CIP 108236 / LMG 21445 / STM815)
KEGG orthology group: K01963, acetyl-CoA carboxylase carboxyl transferase subunit beta [EC: 6.4.1.2] (inferred from 99% identity to bug:BC1001_4907)MetaCyc: 63% identical to acetyl-CoA carboxyltransferase subunit beta (Escherichia coli K-12 substr. MG1655)
RXN0-5055 [EC: 2.1.3.15]
Predicted SEED Role
"Acetyl-coenzyme A carboxyl transferase beta chain (EC 6.4.1.2)" in subsystem Fatty Acid Biosynthesis FASII (EC 6.4.1.2)
MetaCyc Pathways
- superpathway of fatty acids biosynthesis (E. coli) (50/53 steps found)
- superpathway of fatty acid biosynthesis II (plant) (38/43 steps found)
- superpathway of fatty acid biosynthesis I (E. coli) (14/16 steps found)
- superpathway of anaerobic energy metabolism (invertebrates) (14/17 steps found)
- biotin-carboxyl carrier protein assembly (4/4 steps found)
- fatty acid biosynthesis initiation (type II) (3/3 steps found)
- superpathway of fatty acid biosynthesis initiation (4/5 steps found)
- propanoyl CoA degradation I (2/3 steps found)
- anaerobic energy metabolism (invertebrates, mitochondrial) (7/10 steps found)
- 2-oxobutanoate degradation I (2/4 steps found)
- fatty acid biosynthesis initiation (type I) (1/3 steps found)
- 3-hydroxypropanoate cycle (8/13 steps found)
- methylaspartate cycle (12/19 steps found)
- superpathway of the 3-hydroxypropanoate cycle (10/18 steps found)
- candicidin biosynthesis (1/6 steps found)
- glyoxylate assimilation (6/13 steps found)
- jadomycin biosynthesis (3/9 steps found)
- superpathway of candicidin biosynthesis (4/11 steps found)
- 3-hydroxypropanoate/4-hydroxybutanate cycle (9/18 steps found)
- superpathway of L-methionine salvage and degradation (7/16 steps found)
- superpathway of mycolate biosynthesis (26/239 steps found)
KEGG Metabolic Maps
Isozymes
Compare fitness of predicted isozymes for: 6.4.1.2
Use Curated BLAST to search for 2.1.3.15 or 6.4.1.2
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
See A0A2Z5MMG4 at UniProt or InterPro
Protein Sequence (290 amino acids)
>H281DRAFT_06064 acetyl-CoA carboxylase carboxyltransferase subunit beta /acetyl-CoA carboxylase carboxyltransferase subunit alpha (Paraburkholderia bryophila 376MFSha3.1) MSWLDKLLPPKIKQTDPKNRKGIPEGLWIKCPSCEAVLYRNDVEANLHVCPKCDHHMRIG ARERLDGLLDPEGRYEIGQEIVPVDALKFKDSRKYPDRLKEAMDDTDETDAMVVMGGAIH TLPVVVACFEFSFMGGSMGSVVGERFARGAQNALEQKVPFICFTASGGARMQESLLSLMQ MAKTTAMLTKLAEAKLPFISVLTDPTMGGVSASFAFLGDVVIAEPKALIGFAGPRVIEQT VREKLPEGFQRAEFLLTKGAIDMIVDRRKLREELAQLMALLSHQPADAVA