Protein Info for H281DRAFT_06048 in Paraburkholderia bryophila 376MFSha3.1

Annotation: starch synthase (maltosyl-transferring)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1100 1150 transmembrane" amino acids 947 to 964 (18 residues), see Phobius details PF11896: GlgE_dom_N_S" amino acids 467 to 656 (190 residues), 175.4 bits, see alignment E=2.2e-55 PF00128: Alpha-amylase" amino acids 680 to 846 (167 residues), 35.5 bits, see alignment E=1.4e-12 PF21702: GLGE_C" amino acids 1025 to 1107 (83 residues), 59.1 bits, see alignment 6.2e-20

Best Hits

Predicted SEED Role

"Alpha-amylase (EC 3.2.1.1)" in subsystem Maltose and Maltodextrin Utilization or Trehalose Biosynthesis (EC 3.2.1.1)

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 3.2.1.1

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A2Z5MM29 at UniProt or InterPro

Protein Sequence (1150 amino acids)

>H281DRAFT_06048 starch synthase (maltosyl-transferring) (Paraburkholderia bryophila 376MFSha3.1)
MESPNGYAPRIYFFHSLLVGPLDAWPAQFAHAAALGFDHALIGSLFEPGRASHGQVVGNH
ARLHPVFETEQPAVDAIRTLAGGARQQGLTLLVDLVIDRVAADGALYAEHADWFHPLESE
EARLDPRHVHREDNVAYANFNDAGTRAALADWWTQQLLALADAGIGGFRFDSPHRVPAEV
WRHLRDAVRTAHPDVRFLAATPGLARSDLIGLQGAGFDSVFSSVRWWDYRASWMVEEHAV
LARIGGPIAFPEAPYGTRLAAELSDPHDSSIVERAYRRALYAASAIGTGWLMPMGFEYGV
SEPMSQTRGDASQFALACQAKKFDLTPQITRANELARTSRALHANGELRALSGPGAPAAV
LLRADQPDLRDAAEAVLIAINPELGAPVRVDPARFLASVPGNFTRFVPLDAPGRASPAAL
TPFALAPGAVRLFQAVAEKPICLAPPIDKPNSKRSGRKTVIEAINAPRVAIESVTPSVDN
GRFPAKRSVGERAEISAAIFAEGHDKIAAAVLWRAADENTWHEVLMAPAQPAGLDIWKAR
IPLDRMGRHEFTVIAWRDDFASLVEHVEKKLKAGQTVETELDEAAHLFALVLAEVETTEG
AVIEPLKNIVEHFTKADAETKLKLLLDAGTRKAMTAARHRPFLSRDPVTYKIDAERTAAR
FASWYEIFPRSMSDDESRHGTFADVTTKLPRIRDMGFDVLYFPPIHPIGVSNRKGRNNTL
NAQPGDVGSPYAIGAAEGGHTAVHPQLGTLDDFKKMLAAAHAHGLEIALDFAVQCSPDHP
WLKEHPTWFAWRPDGTLRYAENPPKKYQDIVNPDFYAHDAKPDLWLALRDVFLFWIDAGV
HIFRIDNPHTKPLPFWEWVIGDVRARHPDTIFLAEAFTRPRMMYRLGKIGFSQSYTYFTW
RESKRDFIEYLTDLTQTSARDFYRPNFFVNTPDINPRHLQSQGRTGFLIRAALASTLAGL
WGVYSGFELCEAAALPNSEEYLDSEKYQLRAWDWNRPGNITAEIAALNRIRRANPALQTH
LGLTFLPAHNDNILFFEKATETRDNVIVVAINLDPFNEQGADIELSWETFQNWNLHDQGA
LEVTDQMTGARFTWHGRWQHVRLAPGQPFSIWRIAPLGGLPAERPDEADSDSTSDLHADA
GNPTPTEGAI