Protein Info for H281DRAFT_06044 in Paraburkholderia bryophila 376MFSha3.1

Annotation: Protein of unknown function (DUF2384)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 145 PF20432: Xre-like-HTH" amino acids 25 to 85 (61 residues), 44.2 bits, see alignment E=2e-15 PF09722: Xre_MbcA_ParS_C" amino acids 90 to 143 (54 residues), 43.1 bits, see alignment E=3.3e-15

Best Hits

Swiss-Prot: 57% identical to Y4OB_SINFN: Uncharacterized protein y4oB (NGR_a02270) from Sinorhizobium fredii (strain NBRC 101917 / NGR234)

KEGG orthology group: None (inferred from 90% identity to bgf:BC1003_4567)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A2Z5MKK6 at UniProt or InterPro

Protein Sequence (145 amino acids)

>H281DRAFT_06044 Protein of unknown function (DUF2384) (Paraburkholderia bryophila 376MFSha3.1)
MAHAARATQPEAPLHRPTSEPSFAEMSAAGLRAFFRIAQDWDLSADEQIMLLGSPGRSTY
FKWKQAPETARVGRDTLERLSLLLGIYKALQILLPQPGTADTWIKRPNSAPPFGGRRALD
RMLAGNVSDLVAVRQYLDAMRGGWA