Protein Info for H281DRAFT_06030 in Paraburkholderia bryophila 376MFSha3.1

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 269 transmembrane" amino acids 26 to 46 (21 residues), see Phobius details amino acids 52 to 70 (19 residues), see Phobius details amino acids 98 to 119 (22 residues), see Phobius details amino acids 147 to 172 (26 residues), see Phobius details amino acids 193 to 216 (24 residues), see Phobius details amino acids 225 to 247 (23 residues), see Phobius details

Best Hits

Swiss-Prot: 67% identical to Y3999_BURTA: Probable inner membrane protein BTH_II0599 (BTH_II0599) from Burkholderia thailandensis (strain ATCC 700388 / DSM 13276 / CIP 106301 / E264)

KEGG orthology group: None (inferred from 96% identity to bug:BC1001_4939)

Predicted SEED Role

"FIGfam005179"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A2Z5MKJ1 at UniProt or InterPro

Protein Sequence (269 amino acids)

>H281DRAFT_06030 hypothetical protein (Paraburkholderia bryophila 376MFSha3.1)
MQLIEVPAKTGYVWFRQGIWLFRKNPLAFLTLFFTYLLVMTLVAQIPLIGSVLPLAFIPG
VAVGFMAACRNTIAGKPVFPTILVDGFRSYGPVVARRLIVLGVFYVIAMAVVLAGSALAD
GGMLLKVMLGAGAAMDPQAVANSNMPLAVVTAFAFYIPVAMLFWFSPILAAWHDVPPVKA
MFFSLVSCWRNRGAFIVFGALWFAVAMIVSLGLSALMQALGAGDFAFAVLMPATMIVTTM
LYCSFYATYRGCYGVQTPQTPDLPTTPAA