Protein Info for H281DRAFT_05945 in Paraburkholderia bryophila 376MFSha3.1
Annotation: monosaccharide ABC transporter substrate-binding protein, CUT2 family
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
KEGG orthology group: K02058, simple sugar transport system substrate-binding protein (inferred from 89% identity to bge:BC1002_5585)Predicted SEED Role
"ABC transporter, substrate binding protein"
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
See A0A2Z5MIZ3 at UniProt or InterPro
Protein Sequence (345 amino acids)
>H281DRAFT_05945 monosaccharide ABC transporter substrate-binding protein, CUT2 family (Paraburkholderia bryophila 376MFSha3.1) MFRSAKQATITLAAASCMFAGAAHAQVATGDTSQKKIALSNSFAGNSWRQSMLKSWNTVS QQAVADKKIGAAPAFTTAENQVTEQAQQVQNLILQGYNAIVIDAVSPTALNGTIKKACAA GVVVVSFDGIVDEPCAYRVNFDFKGWAEQGVDYLAQRLNGKGNILEVRGVAGISVDNLMH EGVLDAMKKHPGMKLVGSVNGDWTQSVAQKAVAGILPTLPQVDGVATEGEMSFGIAQAFK AANRTTPPMIIGSTYPELNWWNEQTKSGYQSRSLSNPPGAVTFAFWVAQQVLAGKKIPKD VTINVPLLEISQQELPAKLAATPPGGISDVTYTLPQTVALLDKKK