Protein Info for H281DRAFT_05873 in Paraburkholderia bryophila 376MFSha3.1

Annotation: amino acid ABC transporter ATP-binding protein, PAAT family

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 PF00005: ABC_tran" amino acids 26 to 173 (148 residues), 130.9 bits, see alignment E=5.5e-42

Best Hits

Swiss-Prot: 56% identical to GLNQ_GEOSE: Glutamine transport ATP-binding protein GlnQ (glnQ) from Geobacillus stearothermophilus

KEGG orthology group: None (inferred from 91% identity to bge:BC1002_0401)

MetaCyc: 56% identical to L-glutamine ABC transporter ATP binding subunit (Escherichia coli K-12 substr. MG1655)
ABC-12-RXN [EC: 7.4.2.1]

Predicted SEED Role

"Glutamate transport ATP-binding protein"

Isozymes

No predicted isozymes

Use Curated BLAST to search for 7.4.2.1

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A2Z5MIA5 at UniProt or InterPro

Protein Sequence (250 amino acids)

>H281DRAFT_05873 amino acid ABC transporter ATP-binding protein, PAAT family (Paraburkholderia bryophila 376MFSha3.1)
VSDSIHNKPVISLSGVSKSFGATRVLNDINLDVRAGEVLVLIGASGSGKSTVLRIMAGLE
TTDSGEVWVNEVPLHDPKRAREIRGHVGMVFQQFNLFPHKTALGNVTLALIKARGMSPAD
ARKRAMDSLDRVGLADRASHYPSQLSGGQQQRVAIARALAVEPGIMFFDEATSALDPELV
GEVTEVMRGLARDGMTMVVVTHEMGFARKTADRVLFMDKGVIAEQGDPEQIFVNPSNERT
RQFLSRVLDH