Protein Info for H281DRAFT_05816 in Paraburkholderia bryophila 376MFSha3.1

Annotation: soluble lytic murein transglycosylase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 642 signal peptide" amino acids 1 to 17 (17 residues), see Phobius details PF14718: SLT_L" amino acids 406 to 465 (60 residues), 34.8 bits, see alignment 1.5e-12 PF01464: SLT" amino acids 483 to 589 (107 residues), 83.8 bits, see alignment E=6.9e-28

Best Hits

KEGG orthology group: K08309, soluble lytic murein transglycosylase [EC: 3.2.1.-] (inferred from 97% identity to bug:BC1001_3340)

Predicted SEED Role

"Soluble lytic murein transglycosylase precursor (EC 3.2.1.-)" (EC 3.2.1.-)

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 3.2.1.-

Use Curated BLAST to search for 3.2.1.-

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A2Z5MGW9 at UniProt or InterPro

Protein Sequence (642 amino acids)

>H281DRAFT_05816 soluble lytic murein transglycosylase (Paraburkholderia bryophila 376MFSha3.1)
MALAAAALVACSTASAVKPLPISQFTNDDQIFVQLREAARNNDAARAVQLASMIPSYPAP
SYLEYFQIKPQLFDSGGHARVDAPDAPVLAFLQKYDGQAIADRMRNDYLTVLGTRHDWRN
FDQQYARFVLNDDTQVKCYALESRASRGENVADAARALLVDPKWYGDGCVDLITVLGVNK
QFSTDDIWQQIRLAYEQNYPNTGSKLVDALGDQAPDPVLFGQATSTPPLLLARGVSPDAQ
SHQLALLAITRMARNDPAMAAATFASVAPSLNSPERAIGWGTIAYQAAAKQMPSATDWYR
LSANAPLSNPAYEWRTRTALLAGDWNMVRWSIEQMPVALRNQPSWVYWHARALKQAGDTT
TANQEFESISQGFNFYGQLAAEELGQKISVPPKTMVTDSEVQQAGNTPGFDLAQRFYALN
LRLEGNREWNWPLRTMSDRQLLAAAEYARRIQLYDRTVNTADRTKTEHDFSLRYLSPFRD
IVERDAQSSGLDVEWAYGLIRQESRFIINARSEVGAGGLMQLMPGTAQLVAKKIGLGPIS
REQMNDINTNILLGTNYLSMIYNQFDGSAVLATAGYNAGPGRPRNWRQTLQHPVEGAIFA
EAIPFQETRDYVKNVLSNTVYYAALFEGRPQSLKARLGYIAP