Protein Info for H281DRAFT_05815 in Paraburkholderia bryophila 376MFSha3.1

Annotation: 5,10-methenyltetrahydrofolate synthetase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 180 TIGR02727: 5-formyltetrahydrofolate cyclo-ligase" amino acids 6 to 171 (166 residues), 122.1 bits, see alignment E=1.2e-39 PF01812: 5-FTHF_cyc-lig" amino acids 23 to 171 (149 residues), 102 bits, see alignment E=2e-33

Best Hits

KEGG orthology group: None (inferred from 89% identity to bgf:BC1003_3302)

Predicted SEED Role

"5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2)" in subsystem Folate Biosynthesis or One-carbon metabolism by tetrahydropterines or Serine-glyoxylate cycle (EC 6.3.3.2)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 6.3.3.2

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (180 amino acids)

>H281DRAFT_05815 5,10-methenyltetrahydrofolate synthetase (Paraburkholderia bryophila 376MFSha3.1)
MLLEARLQAASEPTNNAALGRCVLDALKHFDVQSVGFYWPLAGEFDARAAISVWLTGSTQ
REASLPIIKERGLPLEFHAWSPDTPMKIGHHKIAEPSTGRMVTPELLLVPCVGFDADGYR
LGYGGGYYDRTLAGWPGAKKPITVGVAYEACRTSALEREVHDIPLDMIVTEAGLHARSVG