Protein Info for H281DRAFT_05780 in Paraburkholderia bryophila 376MFSha3.1

Annotation: flagellar FliL protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 165 transmembrane" amino acids 21 to 43 (23 residues), see Phobius details PF03748: FliL" amino acids 64 to 165 (102 residues), 86.4 bits, see alignment E=8.6e-29

Best Hits

Swiss-Prot: 38% identical to FLIL_SALTY: Flagellar protein FliL (fliL) from Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)

KEGG orthology group: K02415, flagellar FliL protein (inferred from 94% identity to bug:BC1001_3377)

Predicted SEED Role

"Flagellar biosynthesis protein FliL" in subsystem Flagellum

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A2Z5MEP2 at UniProt or InterPro

Protein Sequence (165 amino acids)

>H281DRAFT_05780 flagellar FliL protein (Paraburkholderia bryophila 376MFSha3.1)
MATTPANQQAAPASPGPLKRIILIALIAIVAAGGAGAGVWFFMSKRAPAAATAAAPAPAP
APTFFPLESMTVNLQSDDGQQHFLRIGLTLKLTDPKTPQELTEHMPEIRSRILLALSNHH
PDELAPLEGKHALSTELRTLIEQPTDKGAAPIHVQDVLFTEFVVQ