Protein Info for H281DRAFT_05644 in Paraburkholderia bryophila 376MFSha3.1

Annotation: phospholipid-binding lipoprotein MlaA

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 351 signal peptide" amino acids 1 to 37 (37 residues), see Phobius details PF04333: MlaA" amino acids 37 to 228 (192 residues), 256.8 bits, see alignment E=6.6e-81

Best Hits

KEGG orthology group: K04754, lipoprotein (inferred from 92% identity to bug:BC1001_3207)

Predicted SEED Role

"Nucleoside ABC transporter, periplasmic nucleoside-binding protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A2Z5MFP3 at UniProt or InterPro

Protein Sequence (351 amino acids)

>H281DRAFT_05644 phospholipid-binding lipoprotein MlaA (Paraburkholderia bryophila 376MFSha3.1)
MQTSHAGSAGAFRVAKLAVAAALLAGCTTVQTPTKGDPLEGLNRTIFTVNDKLDQYALKP
VAKGYVFITPQPIRDSVTNFFSNIGDVYIAANNLLQLKITDGVQDIMRIVINTIFGVGGL
FDVATLAKLPKHDNDLGLTLGHYGVPAGPYLVLPLFGPSTVRDAVGSIGNYYVNPLSYVD
PAGLSWALYGLNIVNTRANLLNASDVLEGAALDKYSFVRNAYLQRRQYLLSDGKQSQALP
NYGDEAPLPKYEDVDGTAAGAPAGAVTGTAGAAGTNSAAAKASAASGASAATPPQAASGT
GTANNATAPESASGSSETPPLDLNGGPETTQIPAGQLVPPTRFNIPSFKLR